Salmo salar (Atlantic salmon): 106604365
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Entry
106604365 CDS
T04363
Symbol
cssa05h11orf80
Name
(RefSeq) chromosome ssa05 open reading frame, human C11orf80
KO
K24789
type 2 DNA topoisomerase 6 subunit B-like
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106604365 (cssa05h11orf80)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
106604365 (cssa05h11orf80)
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Gene cluster
GFIT
Motif
Pfam:
DUF4554
Motif
Other DBs
NCBI-GeneID:
106604365
NCBI-ProteinID:
XP_014054397
UniProt:
A0A1S3RRE3
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Position
ssa05:complement(16094229..16100766)
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AA seq
471 aa
AA seq
DB search
MMKHIQQVLRSLMLLARWGRERLEKSLVVDGGGLLVLLWAAPCQPPSGQVVNCTVAVAGP
WCSGVTVKEVQQEFWQRLGPSASHCPDPDPEELCDFTENYGPLHFLLSFQISEVKLDRCT
VWSHTEGFLHKLSLTNAGVKIHLKLKLEGETYQRIFSGKAERLALKDQTVIMDVASSITQ
PPMSVGAGQWCQRVHPVLGGGLPLLIPPEAMERGLYGELHLLPVTVLTPCVLQYPNLATR
VTRIQVLLYSPSNLPLLGPSAFLQQLPACLALEGLGLSGLTCTPTHSTTSDPLCSDTVYS
IDRAQCQETEPEWIPAVDQNLSLFLFLQHSDPFHSQLSDFMASEELLELHLEDVLRYNRE
AVTAALNTLLQSTLKDQQLRDKAQEKMCSALWVMLRSIGCVVSSSTNMEFRAACLDRMMV
QDTYELSASLHESLQRVTAGRVVPSGRCYWGQADTLTCSRPSKNFASGNEI
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacatatacaacaggttttacgatcactgatgttgcttgcccgttgggggaga
gaacggctagaaaagtccttagtcgtagatggagggggactactggtcctgttgtgggcc
gcgccctgccagccacccagcggccaggtggtcaactgcacagttgcagttgcaggaccc
tggtgctcaggagtcacagtgaaagaagtccaacaagagttctggcagagactgggcccc
tctgcctcccactgccctgacccagacccagaggaactgtgtgacttcaccgaaaactac
ggccctctccacttccttctgtccttccagatcagtgaggtgaaactggacagatgtacg
gtgtggtcacacacagagggcttcttgcacaaactgagcctgactaacgcaggggtgaaa
attcacctcaaattgaaattggaaggagaaacataccagagaatttttagtgggaaggca
gagagactcgccctgaaggaccagactgtgatcatggacgttgcttcttctatcacgcag
cctcccatgtcagtaggagcaggccagtggtgccagcgagtccaccctgtattaggaggt
gggttacctctacttatcccgcctgaggccatggagagaggcctgtatggggagctgcac
ctcctaccagtcactgttctcactccctgtgtgttgcagtaccccaacctggcaaccaga
gtaacgcgcatacaggtgctgctgtacagccccagtaaccttcccctgctggggccctca
gccttcctacagcagctgcctgcctgtctggccctggaggggctgggtctctctgggctt
acctgtaccccaacacactccaccacctcagatccactctgcagtgacactgtgtacagt
atagacagagcacagtgtcaggaaactgagccagaatggatccccgctgtggatcagaac
ctctctctgttcctgttcctccagcacagtgaccccttccactcccagctctctgacttc
atggccagcgaggagctgttagagctccacctggaggatgtgttgaggtacaacagggag
gcagtgacagcagccctgaacacactgctgcagagcacgctgaaagaccagcagctgaga
gacaaggctcaggagaagatgtgctctgccctgtgggtgatgctgagatctataggctgt
gtggtgagcagcagcaccaacatggagttcagagctgcctgtctggaccgcatgatggtg
caggacacctatgagctgtcagcctctctccatgagtctctacagagagtcacagctggc
cgtgtagtgcctagtggcaggtgttactggggacaggcggacacgctcacctgcagcaga
ccttccaagaactttgcaagtggaaatgaaatctga
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