Salmo salar (Atlantic salmon): 106604382
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Entry
106604382 CDS
T04363
Symbol
PRP39
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106604382 (PRP39)
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106604382 (PRP39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_12
TPR_16
HrpB1_HrpK
TPR_MalT
UTP6_C
TPR_21
Motif
Other DBs
NCBI-GeneID:
106604382
NCBI-ProteinID:
XP_014054425
UniProt:
A0A1S3RQ22
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All DBs
Position
ssa05:complement(15751206..15764415)
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AA seq
729 aa
AA seq
DB search
MAAEGSDSEDLNTNGLMEAPSAPEAMEAVHLPTEKEEASEENGGGGASEAPEAAAVTAYN
MPLAENEEEEDGEFPADFDRLWKLAHDNPQDFSSWTDLLQYCEQESHMTASRRALVAFLA
RYPLCYGYWKKFADLERRAGYTNKAQEVCVQGLKAIPLSVDLWIHYINLLLGTLNMNLPE
SSQRIRSAFEEAVAAAGLDFHSDRLWELYIEWEKEQGDMKAATGVYDRVLRVPTQLYSSH
YEKFKTHLNAHAPKDVLSAVEYEGLLEESKQSHKTEKSELAEGEEELPPGEEKEPTEEEL
IPKMRELLLARREKVYRDLEGEVRKRWNFEEAIKRPYFHVKPLDRTQLRAWHSYLDWELT
ELGGGGEKEVKTETEPEAMEGQEEKQKESKEGSKSSGIVAGGDQRVRILFERCLIACALY
EEFWTKYVHYLEPQSLDEARGVFRRACEIHLAHKHTMHLQWATFEERHGDLTEARRVLEA
LETSVPGLAMVRLRRAGLERRAGRLDESEALLRDAVAQAKETPHLHAFYSIKLARLLLKL
CKNPSKARGVLQEALEISPDDGKLHLNLLELEVSGDPRGSAEGVQQCVTRALAAPLSPQT
KILFSQRGLQYAEDYGTSVHSVLTVYEEHQKLLKELGNKKRVAENGDSEDPEKMSKGEDG
SAVPAPPQAPPTMPHVPMMTPPPPMMGGDMSAAHAGYGGYGSWHQQPQYGGYGGYQQAWN
YNQGYYPPS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaaggctcggattcagaagacctgaacaccaacgggctaatggaggctcct
tcagctccggaagccatggaggctgtccatcttccaacagagaaggaagaggcatcagag
gagaatggtgggggaggagcctctgaggctccagaagcagcagctgtgacagcatacaac
atgcctctggcagagaatgaggaggaagaagacggagagtttccggcggactttgaccga
ctctggaagctggcccatgacaatccacaggacttctctagctggactgacctgctgcag
tactgtgagcaagagagtcacatgacagcgtcacgtcgggcactggtagcctttctggca
cggtacccactgtgctacggatactggaagaagtttgccgacctggagcgacgtgctggc
tacaccaacaaagctcaggaggtgtgtgttcagggtctgaaggccatccccctgagtgta
gatctgtggatccactacattaacctgctactgggcacgctcaacatgaacctgccagag
tcctctcagcgcattcgcagtgcatttgaggaggcggtggcggcagcaggactggacttc
cactctgaccgtctgtgggagctgtacatcgagtgggagaaggagcagggagacatgaag
gctgccactggggtctacgacagagtcctcagagtccccactcagctgtacagcagccac
tatgagaaattcaagactcatcttaatgcccatgcgcccaaggacgtcctctcagcagtg
gagtatgaggggttgcttgaggaatctaaacagagccacaagactgagaagtctgagttg
gctgagggggaagaggagttaccacctggggaagagaaggaacctacagaggaagagctg
attccgaaaatgcgagagctcctattggctcgcagagagaaggtgtaccgagacctggag
ggagaggtcaggaagaggtggaactttgaggaagctatcaagcgtccatatttccatgtg
aagcctctggaccggacccagctgagggcctggcactcctacctggactgggagctcacc
gagctgggggggggcggtgaaaaggaggtgaagaccgagacagaaccagaggccatggag
ggccaggaagagaagcaaaaggagtcaaaggaggggtcaaagagcagtgggatcgttgcc
gggggagaccagagggtacggatcctgtttgagcgctgtctgattgcctgcgctctctac
gaggagttctggaccaagtatgttcactacctggaacctcagagtctggacgaggcgcgg
ggagtgttcaggcgagcctgtgagatccacctggcccacaaacacaccatgcacctgcag
tgggccaccttcgaggagaggcatggtgacctaacagaggcacggcgtgtgttggaggct
ttggaaacctcagtgccgggattggccatggtccggctgcgcagggcggggctagagaga
cgggcgggccgtctagatgaatcagaagctctgctcagggacgcggtggcccaggccaaa
gagacgcctcacctccatgcgttctactccatcaaactggcccggctgctgctgaagctc
tgcaagaaccccagcaaggcccggggagtcctgcaggaggcgctggagattagcccggat
gacggtaagctgcacctgaacctgctagagctggaggtgtccggtgaccccagagggtcg
gccgagggggtgcagcagtgtgtgacgcgggcgctggccgcacccctctccccacagacc
aagatcctcttctcccagaggggcctgcagtacgctgaggactatgggacctctgtgcat
agtgtgctaacagtctatgaggagcatcagaagctactgaaagagcttggcaacaagaag
agagtggctgagaacggagacagtgaggacccagagaagatgagtaaaggagaagacggc
tctgctgtgcccgctccaccacaggcccctcccacaatgccccatgtccccatgatgaca
ccacctccacccatgatgggtggggacatgagtgcagctcatgcaggctacggaggatat
ggaagctggcatcagcaaccacagtatgggggatacggaggctaccagcaagcctggaac
tacaatcaaggttactaccctcccagctaa
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integrated database retrieval system
