Salmo salar (Atlantic salmon): 106604451
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Entry
106604451 CDS
T04363
Name
(RefSeq) protocadherin-19-like
KO
K16499
protocadherin delta 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106604451
Cell adhesion molecules [BR:
sasa04515
]
Cadherins
Protocadherins
106604451
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
ResB
Motif
Other DBs
NCBI-GeneID:
106604451
NCBI-ProteinID:
XP_014054552
UniProt:
A0A1S3RRU2
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Position
ssa05:complement(22161290..22245492)
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AA seq
1109 aa
AA seq
DB search
MYVKEMDFMQILWIVLLCWTGADSVINLKYSINEEQKAGYIIGNVTKDAQTQGFAIAPRA
PYLRVISNSEPRWVELSPAGLLLTHQKIDRDVACRQTSKCTVSLEVMSNSMEICVIKVEI
VDLNDNAPRFPTNHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGSKIAELVVQKSLDRETQSHYSYEISAEDGGDPPKIGAVQLNIKVMDSNDNNPVFD
QPVYTVNVMENSPINTLVIDLNATDPDEGTNGEVVYSFNSYVTEKTRDVFKIDPRTGIIT
VNGPLDYEATHIYEIDVQAKDLGPNSIPAHCKVTVNVMDANDNPPVISLLSVNTELIEVS
ENAPRGYVIALVRVSDKDAGANGKVQCRLQGNVPFRLQEYESFSTILVDGRLDREQRDTY
NLTIQAEDSGTPPLRATKSFVVKVTDENDNPPHFLKPHYQEMVLENNLPGSCLLAVSAVD
PDLGMNGTVSYTIVPSEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDQGN
PSLSSNATVRIVVLDVNDNTPVMTTPPLVNGTAEVSIPRNAGVGYLVTQVKADDYDEGEN
GRLTYTISEGDRPFFEIDQVNGEVRSTKMFGEQVKSTYEITVVARDHGKPSLSASAYIVV
YLSPDLNAQESIGPVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCSFFYL
RRVAEYSYGSQKKSSKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSLP
LGCRRSESTFLNVENQNSRNAAPNHGGYQQHPFASGQGPQQPDLIINGMPLPETENYIDS
SYVNSRAHLIKSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYIDTAVNDVLNMTVP
PNVCQLPDQGRRKDPSEGFHCQEECRILGHSDRCWMPRVPGPARGKSPEHGHPRNNVIAL
SIEATTVDVPHYEDCGTGTIKRTFATFGKDGPEDPERGELKGNKRTMMESQVCSPKANGG
AVREAGNGREAASPITSPVHLKSPLAKVPSGYNTLRCRGAERIANHSMLRQPEGKDSEPA
VREINTLLHDGSHLEKESPSSKRLKDIVL
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtcaaggaaatggattttatgcaaattctttggatagtccttttatgctggact
ggggctgattctgttatcaatttgaaatactcgataaacgaggagcagaaggctgggtat
atcattggaaacgtgacaaaggacgcacaaactcaaggatttgccattgcaccgcgtgcg
ccgtacttgcgggtcatctcgaattcagagccgcgatgggtggaactcagcccggctgga
cttctcctcacacatcagaaaatagaccgggatgtggcttgccgacagacgtcaaagtgc
actgtctctctggaggtgatgtcaaactccatggagatctgtgtgattaaagttgaaatt
gtggatttgaacgataatgcgcccaggttccccacaaaccacattgacattgaaatctca
gagaatgcttcccctggaaccaggtttcccctagagggggcaagcgatccggactctggg
attttcggtgtgcaatcatattcgatcaccccgaatgagctcttcgggttggagattaag
actaggggggacgggtccaagattgccgaactcgtagtgcaaaaatcgttagatagggag
acccagtctcactactcatacgaaatcagtgcagaagacggcggagaccccccaaagatt
ggcgcagtccagctcaatattaaagtaatggattcgaatgataataatcccgtttttgac
cagcctgtgtatacagtgaacgtgatggagaattctcctattaatacacttgtaattgac
ttgaatgcaacggatcctgacgagggaactaatggtgaggttgtatactcgtttaacagt
tacgtcaccgagaaaactagagatgtattcaaaatcgaccctagaaccggtattatcact
gtaaatggcccgttggattatgaagcaacccatatttacgagattgatgtccaagccaaa
gatttaggtccaaattctattccggctcattgtaaagtcacggtcaatgtgatggatgca
aatgacaacccacctgtcattagtttattgtcggtgaacacagagctgattgaagttagt
gagaacgcgccacgtggatacgttattgcattagtcagggtctcagataaggacgcgggc
gcgaatggcaaggtgcagtgtagactacaaggcaacgtccctttcaggctccaggaatac
gagagcttctcaaccatccttgtcgatggcaggctagacagagaacagagggacacgtac
aatctaactatccaagcagaggacagtggcaccccccctttacgcgccactaagtcgttt
gtagtgaaagtcacagatgaaaatgataaccctccccacttcctaaaaccccattaccaa
gagatggtcctagaaaataacctgcctggctcatgtttgctggcagtgtctgctgtagat
cccgatttgggcatgaatggcaccgtttcatacaccatcgtacccagtgagattaaacac
atggacgtaaacacatatgtcagtataaatccttcaggacgtatttactccatgagatca
ttcgaccatgagtacactaggacttttgacttcaaagttttggccagggaccaggggaat
ccgtccttatccagtaacgcgacggtgcgcattgtcgttttggatgtgaatgacaataca
cctgttatgaccactccacccctggtaaatggcaccgcggaagtatccattccaaggaac
gcaggagtgggttacctggtgacccaagtcaaggccgacgactatgacgaaggggagaat
ggaaggctgacctataccatttcggagggagacaggcctttctttgagatagaccaggtg
aatggagaggtgcggtccaccaagatgttcggggagcaggtcaagtcgacctatgagatc
acagtggtggcacgcgaccacgggaaaccgtcgttgtcggcctctgcatacattgttgtc
tacctctcaccggacctgaacgcccaggaatctattggaccagtaaacctgtcattgatt
ttcatcattgccctgggctctattgcagctatcctgtttgtcactatgatttttgtggca
gtcaagtgcaaaagggataacaaggagatccgaacgtacaactgcagtttcttctacttg
cgcagggtggcggagtactcgtatggcagccagaagaagtcgagcaagaagaagctgagc
aagaacgacatccgcctcgtgccgcgcgacgtggaggagacggacaagatgaacgtggtg
agttgctcgtctctcacctcctcgctcaactacttcgactaccaccagcagagcctgccg
ctgggctgcaggcgctccgagagcaccttcctcaacgtggagaaccagaactcacgcaat
gccgcgcccaaccacggtggctatcagcagcatcccttcgccagcgggcagggtccccag
cagcctgacctcatcatcaacggcatgccgctgccagagacggagaactatatcgactcc
agctacgtaaacagccgagcacaccttatcaaaagcacatcgacattcaaggacctggag
ggcaatagtctgaaggacagcgggcacgaggagagcgaccagacggacagtgagcacgac
gtccagagaggccactacatagacacggcagtcaacgatgtgctcaatatgaccgtgccc
cccaacgtctgccagctgcctgaccaaggtaggagaaaagatcccagcgaaggcttccac
tgccaggaagagtgtcgtatcctgggccattcggaccgctgctggatgccccgtgtgcct
ggtccggcccgcggcaagtcgcctgagcacggccacccacgtaacaacgtcatcgccctg
tctattgaggccaccaccgtggatgtgccccactacgaggactgtggcaccggcaccatc
aaaaggacttttgccaccttcggcaaggatggcccagaagaccccgagcggggcgagcta
aagggcaacaagcggacaatgatggagtctcaggtgtgcagccccaaggctaacggcggc
gctgtgcgcgaggcgggcaacgggcgcgaagcagccagtcccatcacctcccctgtgcac
ctgaagagcccgctggccaaggtgccatccggctacaacacgctcaggtgccgtggcgcc
gagcgcattgccaaccacagcatgctgcggcagcccgaggggaaggacagcgagccggcc
gtccgggagatcaacactctcctccacgacggcagccatcttgagaaggagtctcccagc
agcaagcgcctgaaggacattgtgctctaa
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