Salmo salar (Atlantic salmon): 106604520
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Entry
106604520 CDS
T04363
Symbol
neil3
Name
(RefSeq) nei like DNA glycosylase 3
KO
K10569
endonuclease VIII-like 3 [EC:3.2.2.-
4.2.99.18
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106604520 (neil3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106604520 (neil3)
Enzymes [BR:
sasa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
106604520 (neil3)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
106604520 (neil3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-GRF
H2TH
zf-RanBP
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
106604520
NCBI-ProteinID:
XP_014054672
UniProt:
A0A1S3RS56
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Position
ssa05:complement(25800324..25806388)
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AA seq
589 aa
AA seq
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MVEGPGCTLNGEKIRSKVQRGQKVKEFRGSLTTNTQRNATNTISFQIFMGCPYTGVETLG
KELFMYFGQRALRVHFGMDGSMRINPTDIKSRKGSPPVLEIHLTNDTVSFFDSTVEIRLT
EDCEQRVRAMESLDVCSCKFSFSHAEETVRRQSCRMLCDVLLDQAVLPGVGNIIKNEALF
DSGLHPSVKVNQLTDTQLHHLVKMTRDFTLLFYKCRKTGSALNKHYKVYKRPQCGQCNGA
VTVCRLGDNGRMTYFCDRCQTGDASEVNVSKLPTRNTLVGWAYQGSMGSNDHVAKREEEE
WACQLCTLINQPMSKACDACLTPRPELPKDNVSPESSPFTRDLIKYPCNAFSKPQEGLKV
NRRAAFGNTTLMFTDLSPKASCVNSPLPLSSTNSQLNSTARGLNKHDVSQGKISSPNYAS
GGWQDKSGALSKGEATMVSYSQPHKKMRIDHSPFSVSNKPQNGTHHNLSPPQNNAPTGVT
QTQSPPSNPCCVSHGRPSVLRLVTKQGDNKGRQFYTCSLPRETQCKFFEWADTHFPFCNH
AKRCLMRTVLKLGPNNGRNFYVCSFPKGKQCDFFQWAENGPGISILPGC
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggttgagggtccaggatgcacattgaatggagaaaagatccgctcgaaggtccaaaga
ggacagaaggtgaaagaattcaggggaagcttgacgacaaacacacaaaggaatgccacc
aatacgatctccttccagatattcatgggctgtccatacacaggagttgagacccttgga
aaggaactcttcatgtactttggccaaagagctctgagagtccactttggtatggatggc
tctatgcgaatcaaccccactgacatcaaaagcagaaagggatcaccccctgtgctggag
atccacctgaccaatgacacagtctccttctttgactctactgtggaaatcagactgacg
gaggactgtgaacagagagtgagagctatggaaagtctggatgtctgctcctgtaagttc
agcttctcccacgcggaggagactgtgaggaggcagagctgcaggatgctgtgtgacgta
ctcctagaccaggccgtcctaccaggagtgggaaacatcattaagaatgaagccctgttt
gactccggtcttcacccttctgttaaagtcaatcaactcacggatacccagctccaccat
cttgtgaaaatgacacgagatttcaccctcctattttacaagtgccgtaagacaggctcc
gctctcaacaagcactacaaagtctacaaacggcctcagtgtggtcagtgcaacggggcc
gtcaccgtctgtcgcctcggagacaacggaaggatgacgtacttctgcgaccggtgccag
actggggacgcaagtgaggttaacgtgagcaagctcccaaccaggaacacgttagttggc
tgggcttaccaaggcagcatggggagcaacgatcatgtggccaagagggaggaagaggag
tgggcctgtcaactctgcactctgatcaaccagcctatgagcaaggcctgtgatgcctgc
ctgacccctaggcctgagctccccaaagacaatgtcagccccgagagttcacccttcacc
agagatctgatcaagtacccctgcaatgccttctccaaaccacaagagggcctgaaagtc
aaccgcagggccgcattcgggaacaccaccctgatgttcaccgacctcagcccaaaggcg
agctgcgtcaactctccccttcccctatcctctaccaacagtcagttaaattccacagca
agaggtttaaataaacacgatgtctcccagggaaaaataagtagtcccaattatgcctct
ggtggctggcaggacaaaagcggggcgctctccaaaggggaagcaacaatggtctcctac
agtcagccgcacaagaaaatgagaattgatcacagtcccttttctgtcagtaacaaacct
caaaatggaacccaccataatttgagcccccctcaaaataatgcaccaactggggttacg
cagacccagtcccctcccagcaacccttgctgtgtgtcccatgggcggcccagtgtgctc
cgattggtcaccaagcagggggacaacaaaggaagacagttctacacctgctcgctcccc
agggagacacagtgcaaattctttgagtgggctgatacacactttccattctgtaaccat
gcaaaacgctgcctgatgaggactgtactcaaactaggaccaaacaacggccgcaacttt
tacgtatgtagttttccaaagggcaagcagtgtgatttcttccagtgggcagaaaatggt
ccaggaatctccatccttcctggttgctga
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