Salmo salar (Atlantic salmon): 106604562
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Entry
106604562 CDS
T04363
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106604562
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
106604562
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
Ig_2
ig
V-set
LRR_9
LRRNT
LRR_Zer-1
Big_6
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
106604562
NCBI-ProteinID:
XP_014054787
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Position
ssa05:26583658..26888212
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AA seq
625 aa
AA seq
DB search
MDIYYQRPCQSRDRMVDCMSKVMLHTALSCWQPFLGLALVAVFVGSALGCPARCDCSAQS
KSVLCHRKRLPSIPDGIPIETRILDLSKNKLQAVNPDDFAPYPGLEDLDLSGNIISYVEP
GAFNPLYSMHSLSLKSNRIKLIPLGVFTGLSNLTRLDVSDNKIVILLDYMFQDLHNLKFL
EVGDNDLVYISHRAFSGLLSLQTLTLERCNLTVVPTEALSHLHNLVRLHLRYLSISTLQA
YSFKKLFWLRHLEIDSWTSLDSVPANTLHSLNLTTLFITNTNLSTFPYQALKHLHYLTHL
NLSFNRIRHIEGGMLFELVRLRELHLVGAQLSTIEPYAFQGLRWLKVLNVSHNHLDTLEK
GVFQAPEALEVLLIDDNPLVCDCRLMWILQKRHSIFFGDSQPECNTPEGRPFREFKETLL
TYYVTCTKPKIRENKTQTIAVDEGQSAKLHCSAEGIPRPVVSWLSPRRHLLTNKSYGRVK
VHNNGTLEIKVAEVQDGGVYLCMATNTAGNDSLMASLAVKSLGSLYANRTQYYTDPSNAT
TNGTSNVTYGLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRS
KSNGTSVDGGAEGQAGPHRFNMKMI
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggacatctactatcagaggccttgccagagccgtgacagaatggtcgactgtatgagc
aaagtcatgctgcacacagccctctcatgctggcaaccattcctgggactggctctagtg
gccgtctttgtgggttctgccttgggatgtcccgcccgctgtgactgctcagcccagagc
aagtcggtcctgtgccaccgcaaacgcctaccgagcatcccagacggcatccccatcgag
accaggattctggacctgagcaagaacaagctgcaggccgtcaacccggacgactttgcc
ccctaccctggactagaggatctggacctcagtgggaacattatcagctatgtggagccg
ggggccttcaaccctctgtacagcatgcactcgctcagtctcaaaagcaaccgcatcaag
cttattcccctgggagtcttcacaggcttgtccaacctcacacggctggatgtcagcgac
aacaagatcgtcatcctgctggactacatgttccaggacttgcacaacctgaagttcctg
gaagtgggtgacaatgacctggtatacatctcccaccgggccttcagtggactgctgagc
ctacagacactaaccctggagagatgcaacctgacggtggtgcccactgaggccctgtcc
catctgcacaacttggtcagacttcacctccgatacctcagcatcagcaccttgcaagcc
tactccttcaagaagcttttctggctgcgccacctggagattgacagctggacctcgctg
gacagtgtgcctgccaacacgctgcacagcctcaacctgaccacgcttttcatcaccaac
actaacctgtccaccttcccataccaggccctaaagcacctgcactacctaacacacctc
aacctgtccttcaaccgcatcagacacatcgaggggggaatgctgtttgagttggtgcgc
ctgagggaacttcatctagttggggcccagttgtcgaccattgaaccgtacgcatttcag
ggcctccggtggctcaaagtcctcaacgtctcccacaaccatttggacaccctggagaag
ggtgtcttccaagcccctgaggcactggaggtcctcttgatcgacgacaaccccctggtg
tgcgactgtcgcctcatgtggatcctgcagaaaaggcactccatcttctttggcgactcg
cagccggagtgcaacacccctgagggcaggcctttcagggaattcaaggagaccctgcta
acctattacgtgacatgcaccaagccaaaaatcagagagaacaagacacagacgatagca
gtggatgagggccagtcagcgaaactacactgcagtgctgaagggatccccaggccggtg
gtgtcgtggctgtccccacgccggcacctcctcaccaacaagagctatggtagagtcaag
gtccacaacaatgggacgctggagatcaaggtggccgaggtgcaggacggtggcgtgtac
ctttgcatggcaaccaacacggcgggtaacgactcattgatggcctccctagcagtgaaa
agcctggggtcgctctacgcaaacaggacccagtactacacagatcccagcaacgccact
accaatgggactagcaacgtgacctacggcttggacctaaagactatcttagtgtcgaca
gcaatgggatgtttcacattcctgggggtggtcttgttctgctttctgctactgttcgtt
tggagccggggcaagggaaagcataaaaacaacatagatattgaatatgtccctcggtcc
aagtctaatggcacctctgtagatggaggggcagagggacaagctggacctcatcgcttt
aacatgaaaatgatctaa
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