Salmo salar (Atlantic salmon): 106604577
Help
Entry
106604577 CDS
T04363
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04080
Neuroactive ligand-receptor interaction
sasa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106604577
04082 Neuroactive ligand signaling
106604577
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106604577
Ion channels [BR:
sasa04040
]
Ligand-gated channels
GABA-A
106604577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
SAP130_C
TAF4
Zip
Motif
Other DBs
NCBI-GeneID:
106604577
NCBI-ProteinID:
XP_014054827
UniProt:
A0A1S3RSL2
LinkDB
All DBs
Position
ssa05:complement(27618054..27632610)
Genome browser
AA seq
561 aa
AA seq
DB search
MVSAKKEMVTAMYPSYISTLFYLFCLTACVKRISGAIKKDERIYPENFTRILDRLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWMDRRLRYEGPIEILRLN
NMMVSNVWTPDTFFRNGKKSVAHNMTAPNRLFRIMKNGTILYTMRLTISAECPMKLVDFP
MDGHACPLKFGSYAYPKTEMIYTWTKGPQYSVEVPQESSSLVQYDLIGHTVSSEEVKSIT
GEYVVMTVHFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAEMERLKRKPAKCPP
APQTTPVKVKDMEEVLQHNPDTNGNADTNGNLRKRMNYMSQQDIQKAESNSAAATGVTRR
QPQSGQSSSSTGSTGDAIILPHSSPGPASQPNTSFTTLSVKNTPPAPPTTPTIPANQSQP
TADSSLQDLLGPRLEHIQLMGKNEPKQSPCSQPTTTGMGGTSKIDKYARILFPVSFGAFN
MVYWVVYLSKDTMEAKFRGQI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtgactgcgatgtaccccagttatatttcgactctc
ttctaccttttctgcctgactgcttgtgtaaagagaatctctggagcgataaaaaaggat
gagagaatatatcccgaaaatttcacacgcattttagaccgactactggatgggtatgac
aacagactgcgacctggatttggtggtccagtgacagaggtgaaaacagacatttatgtg
acaagtttcgggcctgtctctgatgttgaaatggagtacaccatggacgtcttcttcaga
cagacatggatggacaggaggctgaggtatgaggggcctatcgagatcctccgcctcaac
aacatgatggtctccaatgtgtggactccagacaccttcttcaggaatgggaagaagtct
gtggcccacaacatgactgcccccaacaggctattccgcatcatgaagaacggcaccatt
ctttacaccatgaggttgactatcagcgcagagtgtcccatgaagctggttgacttcccc
atggatggacatgcatgccctctcaagtttggaagctatgcataccctaaaacagagatg
atctatacctggaccaaaggaccacagtattcagtggaggttccccaagaatcatccagc
ctagtgcagtacgatctcattggccacactgtcagcagtgaagaggtcaagtcaatcaca
ggtgaatacgtggtgatgacagtgcacttccacttgaagcggaaaatgggctacttcatg
attcagacgtatatcccctgcatcatgacagtaatcctctcccaagtatccttctggata
aataaggaatcagtcccggctcgaacagtcttcggcatcaccacagtcctgaccatgacc
acgttgagcatcagcgcacgccactccctccccaaggtctcctacgccacagccatggac
tggtttattgccgtgtgttttgcctttgtcttctccgccctcatcgagttcgctgccgtc
aactactttaccaacgcagagatggagagactgaaaaggaagccggcaaaatgcccacca
gcgccccaaacaaccccagtgaaagtgaaggatatggaggaagttctgcagcataaccct
gacaccaacggtaacgcagacaccaacggtaaccttcgaaaacggatgaactacatgtcc
cagcaagacatccagaaagctgagtccaacagcgcagcagctacaggggtaaccaggaga
caaccccagtctggccaatcgtcttcatccacggggtcgactggggacgccatcatccta
ccacactccagccccggccctgccagccaaccgaacacctccttcaccaccctgtccgtc
aagaacacgcccccggctccacccaccaccccaacaataccagccaatcagagccagccc
actgctgactcctccctccaggacctcctaggacctagactggagcacattcaactgatg
ggtaaaaatgagcccaagcagtcgccatgctcccagccgaccaccaccggtatgggcggg
accagtaaaattgataagtacgctcgcatcctgttcccagtgtccttcggagccttcaac
atggtctactgggtggtttacttgtccaaagacaccatggaggccaaatttcgaggccaa
atctag
DBGET
integrated database retrieval system
