Salmo salar (Atlantic salmon): 106604587
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Entry
106604587 CDS
T04363
Name
(RefSeq) PDZ and LIM domain protein 1-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106604587
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
106604587
Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
106604587
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
106604587
NCBI-ProteinID:
XP_014054851
UniProt:
A0A1S3RT03
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All DBs
Position
ssa01:complement(48820927..48837591)
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AA seq
318 aa
AA seq
DB search
MPLRVVVQGPGPWGFRLVGGKDFEQPLTISRVTHGSRAAQANLCIGDQILAIDGEPTENM
THLQAQNKIKGCLEEMVLSIDRSESKMWSPLSSEEGKTNSYKMNLASEPQEVKRIGSTHN
RSAPPFAGFGPKVVTNQYNNPAGLYSSENIKDFNATMDDVKTIGTAANEPSTIPDPSGFL
PPIVADSEVYKMLQENQEADEPPRQSASFKVLQEILESDPDKTSGFKSVKAPATKIGSTV
RNADKLPICDKCGSGIVGMVVKLRDKFRHPECYTCSDCDLNLKQKGHFFVEDQIYCEKHA
RERVTPPEGYDVVTVFPK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcctctacgagttgtcgtgcaaggtcctggaccgtggggattccgtctagttggtggg
aaggattttgaacaacccttgactatctcgcgggtcactcatggcagtagggctgcacag
gccaatctgtgtatcggggatcagatcctggccatagacggagagcccactgagaacatg
actcacctgcaggcacagaacaagatcaagggctgcttagaggaaatggtcctttctatt
gaccgatccgaatctaaaatgtggtcaccgctctcttctgaggaaggaaagaccaactct
tacaagatgaatcttgcatctgagccacaggaggtgaaacgcataggttccacccacaac
aggagcgccccgccattcgctgggttcggccccaaggtggtaaccaatcagtacaacaac
cctgccggtctgtactcctcagagaatatcaaggacttcaacgcgaccatggatgacgtg
aaaaccatcggcactgctgctaatgagcccagcaccatcccagatccctccggttttctg
ccaccaatagtggcagactctgaggtctacaaaatgctgcaggaaaaccaagaggctgat
gagcctcctcgacagtcagcttcattcaaagtgctgcaggagattctggagtcagatcct
gataagacctctggttttaagagtgtgaaagcgcctgccacaaaaattggctcaacagtg
agaaatgcagacaagttaccaatctgtgacaaatgtggatcagggattgtggggatggta
gtcaagttacgggacaagttccgtcaccccgagtgctacacctgctcagattgtgacctc
aacctgaaacagaagggacatttttttgtggaggaccagatctactgtgagaaacacgca
cgtgagcgagtgactccacccgaaggctatgatgtggtcactgtctttcccaagtag
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