Salmo salar (Atlantic salmon): 106604626
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Entry
106604626 CDS
T04363
Name
(RefSeq) protein transport protein Sec24B-like
KO
K14007
protein transport protein SEC24
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106604626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106604626
Membrane trafficking [BR:
sasa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106604626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
HpaB
TOR1L1_N
DUF3246
Motif
Other DBs
NCBI-GeneID:
106604626
NCBI-ProteinID:
XP_014054923
UniProt:
A0A1S3RRN8
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Position
ssa05:complement(29074035..29108626)
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AA seq
1188 aa
AA seq
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MSAPGFTSLKTSLGHSLNSTPNGGAAPPCQNGPGGQTYPSTYPLTGYYGAGPQQQGYPTI
PGHCTPAPQKAPITNNDHSAYCHQQPLQPTAAPTVAPSAYGAAQGSHPPSLPYGTPTTLP
TSTAPQNPQHAPSFQQPAPYVQPGAYYGQQQYPTSQAQRHPQQPNLVLAPPTSPGAPLYP
IVSYPSVPGSSQYGTLRSSQGPTGPAAVPNLMGAPLHQYAPGNDTSHPASTAAVPPGYSM
APPGQPATVNGQVQAPVLQHYDQRHQAPMTHDHYGGGVAHNTGGADSDIPPLGIPSTSVH
SSPRHQQGMHYGYVANSGASSANAAANVAPSSSSSDEDDDEDEEAGGDSSSTTTGSASPV
PNSYDSLEGGSYPEFSNPPSADMPKQPVYQQRPVSRTDSSPSHGGYNQTGYQHLPQPFPN
MSQLSAALGGLSGVPELEVEALRPVNLLQERNLLPHRPLDAPEPNLSADLKKANCSPDTF
RCTLTNIPQTQALLNKARLPLGLLLHPFRDLTQLPVITSNTIVRCRSCRTYINPFVSFLD
QRRWKCNLCYRVNDVPDEFMYNPVTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQPAVY
LFVLDVSHNAVEGGYLNVFCHTLLENLDKMPGDTRTRVGFLTFNSTIHFYNLNESLSQPQ
MLVVSDIDDIFIPTHDSLLVNLKESRALVRVLLTSLHSMFSQTRETHSALGPALQAAYKL
MSPTGGRVSVFQTQLPTLGAGLLQSREDPNQRSSTKGVQHLGPATDFYKKLALDCSGQQI
GVDLFLLSSQYSDLASLACMSKFSAGSIFYYPSLHHVHNPAQLDKFQKDLERYLTRKIGF
EAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLANINPDSGFAVQMSIEESLADTSLACFQS
ALLYTSSKGKRRIRVHTLCLPVVSQLSDVYAGADVQAITCLLANMAIDRSISSSLSDARD
ALVNAVVDSLSAYKNTVSNIQQSGLIAPAALCLFPLYVLALLKQKALRTGTSTKLDERVF
AMCEFKSQPLQQIMRTVHPDLYRLDTMSDQGALHLNDCIVPQPHLLHLTAEKLTREGAFL
MDCGSVFYLWIGKCCNDMFIRDVLGCPNHASIPPNMTQIPELETPLSERLRALLAWLQDS
RTFSSTLHVVKDDATAKTSFFQHLVEDRSESALSYYEFLLHIQQQMSK
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgccgggttttacgagcctgaaaacctctctcggtcacagcttgaattcaacg
ccgaatggtggagcagcaccaccctgtcagaatggtccaggaggacagacttacccatcc
acctatcctttgactgggtactatggagccgggcctcaacagcagggctaccctaccatt
ccaggacactgtacccctgccccccaaaaagctcccatcacgaacaatgatcacagtgct
tactgccaccagcagccgctgcagcccactgctgcacctactgtagccccctctgcatat
ggagcagcccaaggctcccaccctccctctctgccctatggcacccccaccacccttccc
acctccactgcccctcaaaacccccaacatgcaccttcattccaacaaccagccccctac
gtacagcctggggcctactatggacagcagcagtaccctacctcccaagcgcaacgccac
ccccagcagccaaacttggttttggcaccccccaccagcccaggtgctcccctgtatccc
attgtctcgtacccctctgttccaggaagcagccagtacggtacattgcgttcctcccag
ggtcccaccggcccagcagctgttcccaacctgatgggcgctcccctccaccagtatgcc
ccaggaaatgacaccagtcacccagcatctactgcagcagttccccctgggtatagcatg
gctccacccggccaaccagccacagtcaacggccaggtccaagccccagtcctccagcac
tatgaccaaagacaccaggcacccatgacacatgaccactatggaggaggagtcgcacac
aacaccgggggtgctgacagcgatataccacctttaggaatcccctccacttcagttcat
tcctccccaaggcatcagcaaggcatgcactacggatatgtagccaatagtggcgctagc
tctgccaatgccgccgccaacgttgccccctcgtcatccagctccgatgaggatgatgat
gaggatgaggaagcaggcggggatagttcttcaaccaccaccggcagtgcgtcgccggtg
cccaacagctacgactccctggaaggtggcagctacccagagttctccaatcctccgtct
gccgacatgcccaaacagccagtctatcagcagaggccggtctctaggacagactcctcc
ccctcacacggcgggtacaaccaaactggctatcagcatttgccacagcccttccctaac
atgtcccagctgtctgcggcccttggggggctgagcggtgtaccagagctggaggtggag
gcgctgcggccggtcaacctgctgcaggaaaggaacttgctgccccaccggcccctggac
gccccagaacccaacctcagcgctgacctaaagaaggccaactgcagcccggacacgttc
aggtgtaccctgaccaacatcccccagacccaggccctgctgaataaagcccggcttccc
ctaggcctgctcctgcaccccttcagagacctcacacaactcccagtgatcacgtccaac
accatagtgagatgtcgctcctgtcgcacctacattaaccccttcgtctccttcctggac
cagaggagatggaaatgcaatctctgttacagggtcaacgatgttcctgatgagttcatg
tataacccagtgacccgctcatatggagagccccacaagaggccagaggtacagaactcc
actgtggagttcatagcctcttcagattacatgctgcgtccccctcagcctgcagtgtac
ctgtttgtgctggatgtgtctcacaacgcggtggagggaggctacctgaacgtcttctgt
cacaccctactggaaaacctggacaagatgcccggggacacgcgcacccgagttggcttc
ctcaccttcaacagcaccatccacttctacaacctcaacgagagcctctcacagccccag
atgctggtggtctccgacatcgacgatatcttcattccaacccacgacagtctgctggtg
aacctgaaggaaagcagagcgctggtgagggtactgttgacctccctacacagcatgttt
agccagaccagggagacccacagtgccctgggaccggcgctgcaggctgcctacaaactc
atgtcccccacgggggggcgcgtctccgtgttccaaacccagctacccacgctgggcgcc
ggcctgttgcagtcccgggaggaccccaaccagaggtccagcaccaagggggtgcaacac
ctgggcccagccacagatttctacaagaagctggccctggactgttctggccaacagata
ggagtggacctgttcctcctcagctcccagtactctgacctggcctcactcgcctgtatg
tctaagttctcagcgggcagtatcttctactacccctcgttgcaccacgttcacaacccg
gcccagctggacaagttccagaaggatctggagcgctacctcaccaggaagatcggcttt
gaggccgttatgaggatacgatgcaccaaaggcttgtccatccacacgttccacgggaac
ttctttgtgcgctcgacggacctgctgtccctggccaacatcaacccagactcgggcttc
gccgtgcagatgtctatagaggagagcctggccgacacctcgctggcctgcttccagtct
gcgctgctgtacacctccagcaaagggaagaggcggatcagggtccatactctgtgtctg
ccagtggtgagccagcttagtgatgtatatgccggggctgacgttcaggccatcacctgc
ctcctagccaacatggccattgaccggtcgatatcgtcaagcctgtcggatgcccgggat
gccctggtgaatgcggtggtggactctctgagtgcatacaagaacaccgtatctaatatc
cagcagtctggtctcatcgcccctgcagccctgtgtctcttccccctctacgtgctggca
ctactcaaacagaaagcactgcgcacagggaccagcaccaagctagacgagcgtgtcttc
gccatgtgtgagttcaagagccagccgctgcagcagatcatgcgcacggtccaccctgac
ctctaccgcctggacaccatgtcagaccagggggcgctccatctgaacgactgcatagtt
ccccagcctcatctgctgcacctcacggctgagaagctgaccagagaaggagcgttcctc
atggactgtggcagcgtcttttacttgtggattgggaaatgctgtaatgatatgttcatt
cgggacgtgttgggatgcccaaaccatgcttctataccccctaacatgacccaaattcct
gagctggaaacccctctgtctgaacgactgcgtgcactcctcgcctggctacaggactcg
agaaccttcagctcaactcttcacgtcgtgaaggacgatgctacagcgaagaccagcttt
ttccagcacttggtagaggaccggtcggagtcggccctctcctactacgagttcctgctc
cacatccagcaacagatgtccaagtag
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