Salmo salar (Atlantic salmon): 106604633
Help
Entry
106604633 CDS
T04363
Symbol
ikbkap
Name
(RefSeq) inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
KO
K11373
elongator complex protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sasa03016
]
106604633 (ikbkap)
Transfer RNA biogenesis [BR:
sasa03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
106604633 (ikbkap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
TPR_GEMI5
Beta-prop_NUP159_NUP214
B-prop_COPA_B_2nd
TPR_9
Motif
Other DBs
NCBI-GeneID:
106604633
NCBI-ProteinID:
XP_014054935
UniProt:
A0A1S3RRI6
LinkDB
All DBs
Position
ssa05:complement(29439318..29451317)
Genome browser
AA seq
1322 aa
AA seq
DB search
MRNLRLLKSLRCSELQGPGTPQCFSVRTDTGTVLIASEYSVTELDPRAGQVMNEVSLTAE
RYLPEDGSGTVVGIQDLPDQESVCVATATGDVILYNLSTSQLECVGSVNSGLSAMSWSPD
QELVTLTTGQDTIIMMTKNFEPIIEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKHAAQ
KKTIEVQPAMSWDDRRPRVTWRGDGQLFAVSSVCPQTGARKVRVWNRECVLQSTSETVNG
LEQSLCWKPSGSLIAATQRHPNKHSVVFMEKNGLLHGDFTLPFGKEQVKVKALLWNSDST
VLAVWLEDMTREEGGQVNTYIQLWTVGNYHWYLKQSLYFGSDPQRAPANVSWDPERPLRL
HLVTRGWASLTYDWGWSTDRSHGEDGQDNANVAVIDGDKVLVSTFRQCVVPPPMCAYELQ
LPAPVNLVTFHRRPQRTNELAALTADGHILVYGQGTGDQSDPTARVGGFRSITHAPQLKT
TYRVLLDQEEPLALRLLLWLRGDVFLGVGGCAEGPSQCTLLILGPSEAQSPQSTLEIKSR
VEVEGHVISMCHSSNTGTVALQLEDGRIRKFLWDSLKPSVVGWQDATGYSINFPDPCVQT
ALCTIEKEHLLGLTDRSHLFVDDTEVASNVSSFVVYDDFLLLTTHSHTCRCLRLSTLTVK
GLQVALAADGGQNDQNDETLRRVERGSRIVTVVPQDTRLILQMPRGNLETIHHRALVLAQ
LRKCLDSQKFREAFECMRKLRINLNLIYDHNPKVFLESVETFLRQLDSINHINLFLTELK
EEDTTTTMYPYPSNTTGQSAPGACGKKVDIVCDALRCTMESMDQHKYCLSILTSHVKKTV
PELEVALQKVHELRVNPPGAANAVSAEEALKYLMFLVNVNELYEHSLGTYDFDLVLMVAE
KSQKDPKEYLPFLNMLKTLEPNYQRYTIDKHLKRYRKALHHLSKCGEEHFTEALNLVKDQ
RLYSEALGLYPTDSPQYKALSCAYAEYLVEQQQAEQAGLLLWRCGEAVRALQAFVGSASW
RNALCVAEQIPLPPDQLALLARDLAEKLIELRRYTEAAILLEQYAKDCEEAISALITGAV
WEEALRLVYLYNRQDIIETNLKPALLEACSSQTSYLEAQRAMFIRHKTRLAVVRELKEKA
RLELLDEDVPDCPEAELYSEASSVMSGSRAGSKYSHSNSRISSRSSKNRRKAERKKLSLK
EGTPLEDMALLHALAEIIHSVDKMREEVHSLLKGLMLFQFDGQAGRLQQAYGEALQMMEV
ALPEVWQEGLQQSPAPITGPNSTANSIMASFQQPRPSITQDSETPPPPKMRNGVKWKLSI
LK
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacttgaggttgctgaagagccttcgttgctcggagctgcagggcccgggcacg
ccgcaatgtttctctgttcggacagacaccggtacggtgctcatcgcttcggaatactcc
gtcaccgagttggacccacgagctggccaggtgatgaatgaggtgtcgttgacagctgag
cgctaccttccagaggatggcagtgggacagttgttggtatccaggacttaccagaccag
gagtctgtgtgtgttgctacagccactggtgatgtcatcctctacaacctcagcaccagt
cagttggagtgtgtgggcagtgtaaacagtggtctatcagccatgagctggagcccggac
caggagctggtcactctcaccactggtcaggacaccattatcatgatgaccaaaaacttt
gaaccaatcatagaggttgggatccatcaggatgactttggagaggggaagtttattaca
gtgggctgggggaagaaggagacccagttccatggctcagagggcaagcacgctgcccag
aagaagaccatagaggtgcagccagccatgtcgtgggacgaccgcaggccgagggtgacg
tggagaggagatggccagctcttcgctgtgagctctgtttgcccccagactggtgccagg
aaggtcagagtgtggaacagagagtgtgtcttgcagtcgacaagtgaaaccgtcaacggt
ctggagcagtcgctgtgttggaaaccgtcaggtagtttgatagcagccacacagcgtcat
cctaacaagcacagtgtggtgtttatggagaagaatggcctcctacacggggacttcacc
ctgccctttggaaaagaacaggtcaaggtgaaggcactgctgtggaacagcgactctact
gtgttggctgtgtggctagaggacatgacacgagaagaggggggccaagtcaacacatac
attcagctgtggacagtaggtaactaccactggtacctgaagcagagcctatattttggc
agcgacccccagagggcgccagccaacgtgagctgggatcctgagaggcccctgaggctg
cacctggtgacccgaggctgggctagcctgacctacgactggggctggagcactgaccgc
agccacggggaggacgggcaggacaacgctaacgtggctgtgatcgatggagacaaggtc
ctagtgtcgacatttcgtcagtgtgtggtgcccccacccatgtgtgcttacgagctccag
ctgccggcccctgtcaacctggtgaccttccaccgccggccccagaggaccaatgaactg
gcagcactcaccgccgacggacacatcctagtctacggtcaaggtactggggaccagagt
gaccctactgccagagtgggaggattccgatctatcacacacgctcctcagttaaagact
acctacagggttttgttggatcaggaggagcccctggctctccgtctcctgctgtggctg
aggggggatgtgttcctgggggtggggggctgtgcagaggggccatcccagtgcacgctg
cttatcctgggaccctcggaggcccagagcccccagtcaaccctggagatcaagtcacgt
gtggaggttgaaggtcacgttatcagcatgtgtcacagctccaatacgggcacagtggcc
ctgcagctggaggacggcaggatcaggaagttcctctgggactccctgaagcctagtgtg
gtgggctggcaggacgcgacaggctacagcatcaacttcccagatccctgtgtgcagacg
gccctctgtactatagaaaaggagcatctgctggggctcacagaccgatctcacctgttt
gttgacgacacagaggtggcctccaacgtctcctccttcgtggtctacgatgacttcctg
ctactcaccacacactcgcacacatgccgctgcctccgactcagcacactcactgtcaaa
gggctgcaggtggccttggctgcagacggaggtcagaatgaccagaatgacgagactctc
cgcagggtggaaaggggctccagaatcgtcactgtggtcccccaggacaccaggctcatc
ctacagatgcctcgcggtaacctggagaccatccaccatcgagcgctggtattggctcag
ctcagaaagtgtctggacagtcagaagttccgagaggcctttgagtgcatgaggaagctg
cggattaacctcaacctgatttacgaccacaaccccaaggtgtttttagagagcgtggag
accttcctgagacagctggactctatcaaccacatcaaccttttcctcacagagctcaag
gaggaagataccactacgacaatgtacccatacccatcgaacactacaggccagtcagcg
cctggggcttgtgggaagaaggttgacattgtttgtgatgcgctacgctgcaccatggaa
tctatggaccaacacaagtactgcctgtctatcttgacgtcacatgtgaagaagactgtt
cctgagctggaggttgccctgcagaaagtccacgagcttcgagtgaacccacccggtgca
gccaacgcggtgagtgcggaggaggctctgaagtacctgatgttcctagtcaatgtcaac
gagctgtatgaacactctctgggcacctacgactttgacttggtcctcatggtagctgag
aagtcccaaaaggaccccaaagagtaccttcccttcctgaatatgctgaagactctagag
cccaactaccagcgctacaccatcgacaaacacctgaagagatacaggaaggccctgcac
cacctcagcaagtgtggtgaggagcacttcacagaggccctaaatctggtgaaggaccag
aggctgtatagtgaagccctggggctctatccaacagacagccctcagtacaaggccttg
agctgtgcctacgctgagtacctggtggagcagcagcaggcggagcaggcagggttgttg
ctgtggcgctgtggcgaggcagtccgcgccctccaggccttcgtgggcagtgccagctgg
aggaacgccctctgtgtggcagagcagatcccccttccacccgaccagctggcactgctg
gctagggacctggcagagaaactgatagagctcagaagatatacggaggcggccatattg
ttggagcagtatgctaaggactgtgaggaagccatctcggctctgatcacaggtgcagtt
tgggaagaagcacttcgactggtgtacttgtacaacagacaagacatcattgaaacaaac
ctcaaaccagctctcttggaagcatgtagttctcagacctcctacctggaagctcagagg
gcgatgttcattcgtcacaaaacccgtctggccgtggtacgggagcttaaggaaaaggcc
aggctggagttactggatgaggatgtcccagactgtccagaggcagagctctactcagag
gccagtagcgtgatgtccggcagccgtgccggctccaagtactcacatagtaactcccgc
atctcctcgaggtcgtctaagaatcgccggaaggctgagcgcaagaagctgagtctgaag
gaagggacccccctagaggacatggccctgctgcacgccctggcagagatcatccactct
gtggacaagatgagagaggaggtgcacagcctgctgaagggcctgatgctgttccagttt
gacggacaggcggggaggctgcaacaggcctatggggaggctctccagatgatggaggtg
gcccttcctgaggtgtggcaggagggtcttcagcagagtccggctccgatcaccggtcct
aactccacagccaacagcatcatggcttcatttcaacagccaagaccctcaataacccaa
gattcagagactcccccacccccaaagatgagaaatggtgtcaagtggaagctgagtatt
ttgaagtag
DBGET
integrated database retrieval system
