Salmo salar (Atlantic salmon): 106604646
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Entry
106604646 CDS
T04363
Name
(RefSeq) transcription factor COE3-like
KO
K09103
early B-cell factor
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106604646
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
106604646
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
106604646
NCBI-ProteinID:
XP_014054964
UniProt:
A0A1S3RTA4
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Position
ssa05:complement(29862242..29964018)
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AA seq
595 aa
AA seq
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MFSIQDSLPRGALTMKEEPLTSGMTPVRSWMQSAGILDANTAAQSGVGLARAHYEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTSYIDFVEKDKEYNGEKTNNGIHYRLQLLYSNGI
RTEQDLFVRLIDSMTKVAILYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITP
HAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHP
GDPERLPKEVLLKRSADLVEALYGMPHNNQEIILKRAADLTEALYSVPRSHNQLPSLSGS
AAHSGMMGVNSFSSQLAVNISEASQGDQGYSRNSNSVSPRGYVPSSTPQQSNYNTITSTM
NGYGAGMTNLGVPGSPSFLNGSAANSPYARSTTSPSSSYSSSSSIPLFSGGPIGPYSFSP
VHMISAVKQKSAFAPVVRPQTSPPPTCTTTNGSSLQGFAANPYAYHNYLNTRLFI
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgttctccatccaggacagcctcccgcggggagccttgaccatgaaagaggaaccgctc
acgagtggcatgacaccggtccgctcttggatgcagagcgcggggatattggacgcgaac
acagcagcacaaagcggtgtaggtctggcccgggctcactatgaaaaacagcccccctcg
aacctgcgcaaatccaacttcttccactttgtgttggcgctgtacgaccgacagggccag
cccgtggagatcgagaggacctcctacatagactttgtggagaaagacaaagagtacaat
ggagagaagaccaacaacggcatccattacagactacagcttctttacagtaacggcatc
aggacagaacaagatctgtttgtacggttgatagactccatgaccaaagtggcgatcctc
tacgagggccaggacaaaaacccagagatgtgccgcgtccttctcacccacgagatcatg
tgcagtcgttgttgtgacaagaagagctgtggaaaccgcaatgagacgccctctgacccg
gtcatcattgacagattcttcctgaagttcttcctcaaatgcaatcagaattgtttgaaa
aatgcagggaacccacgagacatgagacggtttcaggtggtggtctccactacagtgaat
gtggatggccatgtccttgctgtctctgacaacatgtttgtccacaacaactccaaacat
ggccggagggctcgacgcctcgacccctctgaagcagctacgccctgcatcaaagccatc
agcccgagtgaggggtggacgaccggaggagccactgtcatcatcatcggagacaacttc
tttgatggactgcaggtggtcttcggcactatgctggtctggagtgagctaatcaccccc
cacgccatccgggtccagacgccccctcgccacatcccaggggtcgtggaggtcacactc
tcctacaaatccaagcagttctgcaaaggggcgccagggcgctttgtctacaccgccttg
aatgagcctaccatcgactatggcttccagaggctacagaaagtcatccccagacaccca
ggagatcccgagaggttacctaaggaagtgctgttaaagagatcggcagacttagtagag
gctctgtatggaatgccccacaataatcaggagatcatcctgaagcgggcagcggacctg
actgaggccctgtacagcgtcccccgcagccacaaccagctgccctcgctcagcggctcg
gccgctcactccggcatgatgggagtcaactccttcagcagccagctggccgtcaacatc
tctgaggcctcgcagggggaccagggttactcccgtaactccaacagcgtatcgccccgt
ggctacgtccccagctccacgccccagcagtccaactacaacaccatcacgtccaccatg
aacggctacggagcgggcatgaccaacctgggggtgccaggctcacccagcttcctcaac
ggctctgccgccaactccccctacgcaagatctaccacctccccctcctcctcctactcc
tcctcctcctccatccctctgttctccggtggacccataggcccttattcattctctcct
gtccatatgatctctgcagtcaaacagaagagcgccttcgcccctgtcgtgcggccacag
acctccccgccccccacctgcaccaccaccaatggcagcagcctacagggttttgcagca
aatccatatgcatatcataattacctcaacacacggcttttcatttaa
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