Salmo salar (Atlantic salmon): 106604738
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Entry
106604738 CDS
T04363
Name
(RefSeq) transcription factor Sox-3-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106604738
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106604738
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106604738
NCBI-ProteinID:
XP_014055184
UniProt:
A0A1S3RTX5
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Position
ssa05:33068928..33070755
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AA seq
300 aa
AA seq
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MYNMMETEIKSPLPQSNSGSAAGNKNNSANDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVNNGVSVGQRMDSYAHMNGWTNSAYSLMQDQLAYPPHHSMNSPQIQQM
HRYEMAGLQYPMMSSAQTYMNAASTYSMSPAYTQQTSNAMGLGSMASVCKTEPSSPPPAI
TSHSQRACLGDLRDMISMYLPPGGDGADHSSLQTSRLHSVHPHYQTAGTGVNGTLPLTHI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagatcaagagcccgctcccgcagtccaattcgggctcc
gctgcgggcaacaagaacaacagtgccaacgaccaggaccgggtgaagaggcctatgaac
gctttcatggtgtggtcccgtggacagcggagaaagatggcacaagagaaccctaaaatg
cacaactctgagatcagcaagcggctcggtgcagactggaaacttttgaccgacgcggag
aagagacccttcatcgacgaggccaagcgtctgcgcgccatgcacatgaaggagcatccg
gattacaaataccgtccccgcaggaagaccaaaaccctgctcaagaaagacaagtattct
ttgccaggaggacttctggcgccaggtgccaacgctgttaacaacggcgtctcggtggga
cagcggatggacagttacgctcacatgaatggctggacaaacagtgcgtactccctcatg
caggaccagttggcctaccctccgcatcacagcatgaacagccctcagatccagcagatg
caccggtatgagatggcagggcttcagtaccccatgatgtcctcggcacagacctacatg
aacgcagcgtccacgtacagcatgtccccagcatacacacagcagacctccaacgccatg
ggcttgggctccatggcctccgtgtgcaagaccgagccgagctcacctccaccggcgatt
acctcccactcccagagagcgtgtttgggggatctgagggatatgatcagcatgtacctg
cctccgggtggagacggcgcggatcactcttctcttcagaccagtcggttacacagtgta
catccgcactatcagaccgcggggactggcgtgaacggaacgctacccctaacccacatt
tga
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