Salmo salar (Atlantic salmon): 106604805
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Entry
106604805 CDS
T04363
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106604805
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
106604805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
DUF7645
Motif
Other DBs
NCBI-GeneID:
106604805
NCBI-ProteinID:
XP_014055324
UniProt:
A0A1S3RUB6
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All DBs
Position
ssa05:complement(32642234..32645420)
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AA seq
271 aa
AA seq
DB search
MHVGYLLDKEGSMYHQGPVRRSGINIPPQNFVPTPQYSDFTGYHHVPNMDTHAQSPGAWG
APYGAPREDWGAYNLGPPNTIPTPMNNSSPGQVSYCSPEYNPMHAPGSAVLQPPPDNISV
AQLSPDRERRNSSYQWMSKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHFNRYITIR
RKSELAGNLGLSERQVKIWFQNRRAKERKLIKKKMGSDGSGGSVHSDPGSVSPLRVPGSL
SPSDIHGSLYPPPGMNTLASIRNIQQVTVTQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgggataccttttggataaagaaggcagcatgtatcaccaaggacctgtaaga
cgatcgggcatcaacatcccaccacagaactttgttcccacgccacaatattccgacttt
actggataccatcatgtgccaaacatggatacgcacgcacagtctccgggagcttgggga
gctccttatggcgcaccgagagaggactggggcgcctataatctgggtcctcctaacact
attcctacacccatgaacaactcatcgccgggacaagtttcctattgctcacctgaatac
aatcccatgcacgcgccagggtcagcagtattgcaaccacctccagataatatttctgtt
gctcaactttccccggatagagaaaggcgcaattcttcttaccagtggatgagcaaaacg
gtacaatcatcttccacgggcaaaacaaggacgaaggaaaaatacagagtggtttacacc
gatcaccagagactggaactggagaaggaattccattttaatcgttacatcactatcaga
agaaagtcagaacttgcggggaaccttggcctttcagaacgacaggtgaagatctggttt
caaaatcgccgagccaaggaaaggaaattaatcaaaaagaaaatgggatctgatggcagc
ggaggatcagtgcacagtgacccgggttcagtgagtcctctgcgggtaccaggctcactc
agtccatcggatattcacggctctctctacccaccccccggaatgaacaccttggcatct
attaggaacatacagcaagttactgtcactcagtag
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