Salmo salar (Atlantic salmon): 106604870
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Entry
106604870 CDS
T04363
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 3-like
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04114
Oocyte meiosis
sasa04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
106604870
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
106604870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106604870
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106604870
Factors involved in mRNA localization
Trans-acting binding proteins
106604870
mRNA cycle factors
P-body specific factors
106604870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
zf-B_box
Motif
Other DBs
NCBI-GeneID:
106604870
NCBI-ProteinID:
XP_014055433
UniProt:
A0A1S3RT28
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All DBs
Position
ssa01:50165031..50239648
Genome browser
AA seq
674 aa
AA seq
DB search
MKIHIWLQNTSYCAQQTMQDDLLMDKNKAQPHQQQDPTVEPPSTPTPSEPPTSESPSSVS
YQAASALNKEKVLMESPILPGLNFHQPQETGGTLSPSFGSTWSTGTTNTVDDNFFQGIPS
VNGTMLFQNFPHHVNPVFGGNFSPQLGLAQSQQQAQQQQQQPPPQQRRSPVSPNQGPFPQ
RTAYSHQSVMNSKASSPASSSGWNNHQNAAWSTASNPWSGLQAGRDPRRAVGVGVGVGVG
VGVPSSMNPISPMKKPYSSNVIAPPKFPRAGPLTPKSWMEDNAFRTDNSNNMLPFQDRNR
PFDAFSLHSLENSLMDMIRTDHDKGKPHPAGGPPMTIADIIWRNHFAGRMGLNFHHPGAD
HIMPLNTRSYGRRRGRSSLFPFEDGFLDDGHGDPSLTPGLNSPTRCQNGERMERYSRKVF
VGGLPPDIDEDEITNSFRRYGHLVVDWPHKAESKSYFPPKGYAFLLFQEETSVQALIDAC
IEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVE
LAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRV
EVKPYVLDDQMCDECQGARCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVK
EGGDRPRHVSFRWS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacacatatggctacagaatacttcatattgcgctcagcaaaccatgcaggat
gatttactgatggacaaaaacaaagcccaacctcatcagcagcaagatccaaccgtagaa
cctccctccaccccgaccccctcggaaccccctacatcagagagcccatcaagtgtgagc
taccaagcagcttcagctctcaacaaagagaaagtgctgatggagtctccgatcctgcct
ggtttaaattttcatcagccgcaggaaaccggtggcaccctgtccccctcatttggtagc
acttggtccactggaaccacaaacaccgtggacgacaatttttttcaaggaataccctcg
gtgaacggaacaatgctttttcagaacttcccccatcacgtcaatccggtatttggaggc
aatttctcacctcagcttggcttggcacagtctcagcagcaagcccagcaacagcagcag
cagccaccgccgcagcaacggagatcccctgttagccccaaccaaggtccctttccacag
agaaccgcatacagtcaccagtctgtcatgaatagcaaggcttcttcacctgcttcatct
tcgggttggaataatcaccaaaatgccgcttggagcacagcctctaatccttggagcggt
ctccaggcaggcagggacccgcggagagctgtgggagtcggggttggcgtgggggtcggt
gtaggggtgccgtcttcaatgaaccccatctccccgatgaaaaagccatattccagcaat
gttatagcacccccaaaattcccgagagctggtcccctcaccccgaaatcttggatggag
gacaacgcctttaggacggacaacagcaacaacatgttgccttttcaggaccggaatcgg
ccctttgatgcatttagcttgcactctttggagaattccttaatggatatgataaggact
gaccatgacaaaggtaaaccacacccagctggtggcccaccaatgactatcgctgatatt
atatggaggaatcattttgcaggacgcatgggtctgaactttcatcaccccggagcagat
cacatcatgccgttgaacaccaggagctatggccgcagaagaggtcgctcttcactcttt
ccgttcgaggacggtttcctggacgacgggcacggtgacccctctctgaccccggggttg
aactcgcccacgcgctgtcaaaacggagagagaatggagcgctactccaggaaggtgttt
gtcggaggccttcctcctgacatagatgaagatgagatcaccaacagcttccgtcgctat
ggacacctggtggtggattggccccacaaagccgagagcaagtcctacttcccacctaaa
ggctatgccttcttgctgttccaagaggagacctctgtccaggccctgattgacgcctgc
atcgaggaggacgggaagctttacctttgtgtctccagccccactatcaaggacaaacca
gtccaaatccgcccctggaacctgagtgacagtgactttgtgatggatggctcccaaccg
ctggacccccgcaagactatatttgtggggggcgtgccccggcctctacgtgcagtggaa
ctagctatgatcatggacaggctgtatgggggtgtgtgctacgccggcattgacactgac
ccggagctcaagtaccccaagggggcgggccgtgtggccttctccaatcagcagagctac
atcgccgccatcagcgcccgatttgttcagttgcagcacaacgacattgacaaacgggtg
gaggtgaagccgtacgtcctggacgatcagatgtgtgacgagtgccagggggcgcgctgt
ggggggaagtttgcccccttcttctgtgccaacgtcacctgcctgcagtactactgtgag
tactgctgggccagtatccactcccgggcgggccgagagttccacaagccactggtgaag
gaggggggcgaccgccctcgacacgtgtccttccgctggagctga
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