Salmo salar (Atlantic salmon): 106604877
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Entry
106604877 CDS
T04363
Name
(RefSeq) protocadherin beta-16-like
Organism
sasa
Salmo salar (Atlantic salmon)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Sde0182_C
7TM_GPCR_Sri
Motif
Other DBs
NCBI-GeneID:
106604877
NCBI-ProteinID:
XP_014055468
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Position
ssa05:35748736..35751607
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AA seq
862 aa
AA seq
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MSDRTMTRQVLLFISVLSLSSVHGQVSYSIPEEMAKGSLVGNIAQDLGLDIKRLKSGKAR
IYTGDSAEYIELNKERGVLLIKEKIDREALCRQTTPCALHLQILLENPMEFYSITVELTD
INDNSPTFEKSEMKYEIGESALSGTRIVLERAIDDDVGVNGLHSYSLKPSDNFILKTQNL
PNGGKNVEMVLQTPLDREKQDQISLILTALDGGEPQLSGTMRIIITVLDANDNAPVCSQA
VYKASVLENAIKGTVLTTVTAFDADQGSYGTVTYHLPQSGAAQLFEIGKEDGVVKLNLNI
DYERTKHYQIDVQARDQGGNTDSCKVIIDVIDINDNKPSINIMSKTNSISEDAKPGTVVT
MMNIQDPDSDGNGKVQCSIEDNIPFVMRSTSNNFYSLVTDSDLDRERDSEYNISVTCSDE
GVPSLSSSVTLTLQISDVNDNAPVFERSSYEAYIIENNTPGLSIFTVEARDADWNQNARV
SYILEDSSVNGVPVSSYVSVSADSGVIHAVRSFDYEQIKDFQFRVKAQDGGSPPLSSNVT
VKIMIQDQNDNAPQVLYPVQTSSSLVAEMVPRSADLGYLVTKVVAVDVDSGQNAWLSYKL
QKATDRALFEVGSQNGEIRTVRQVNDKDAVKQRLTVVVEDNGQPSRSATVNVNVAVADSF
PEVLSEFTDFTHDKEYNDNLTFYLVLALAVVSFLFITCLVVIISVKIYRWRQSRILYHSN
LPVIPYYPPRYADTLGTGTLQHVYNYEVCRTTDSRKSNCQFARPCSQNVLIMDPSSTGTM
QRMQSEKNILDEPDSPIEHHSHGQRRFANRVTCLVAEFSLMVKIIPSFKDQSNISFVFHN
IHDRLRVFHAQHSIHFLFNLQV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagaacaatgacacggcaagtactgttgtttatctcggtcctctctctcagt
tcagtgcacgggcaggtcagttactccattccggaggaaatggcgaaaggctctttagtc
ggtaacatagcgcaggatttgggtttagatatcaaaagactgaaatcaggtaaagctcgt
atttatactggagacagcgcagaatacatcgagctgaataaagaaaggggagttctcctt
atcaaagagaaaatagaccgtgaagcgctctgcagacagacgacgccttgtgcactgcat
ttgcaaatacttttagagaatcccatggaattttacagcataacagttgagttaaccgat
ataaatgataattcgcctacttttgaaaagagtgaaatgaaatatgaaataggcgagtcc
gctttatcgggaaccaggattgtcttagaaagagcaattgatgacgacgttggcgttaac
ggtcttcatagctattctctgaaaccgtccgataatttcattttaaaaactcaaaatttg
ccaaatggtggtaaaaatgttgaaatggttttgcagacgcctctagaccgagagaaacag
gatcagatatcgctgatattaacagcgttagatggaggagagcctcagctatcaggaaca
atgcgaatcatcatcactgtactagacgccaatgataacgcacctgtctgttcccaagcg
gtttataaggccagcgtattggagaacgcgattaaaggaactgttttaaccacagtcact
gcgtttgacgctgatcaaggttcatatggaacagttacctatcatcttccacaatctgga
gcagcccaactatttgagattggtaaagaggatggagtggtcaaattaaacctgaatatt
gattacgaaagaactaaacattatcagattgacgttcaagccagagaccaaggaggtaac
accgattcttgtaaagtaattattgacgtaatcgatataaatgacaacaaaccttccatc
aacattatgtcaaaaacaaatagcatatctgaggatgctaaacctggcacggtcgtaaca
atgatgaatattcaagacccagattctgatggaaatggtaaagtgcagtgctctattgaa
gacaatattccctttgtgatgagatcgacctcaaacaatttctatagcctagtaactgac
agtgacttggaccgagagagagactctgagtataacatcagtgtgacgtgctctgatgag
ggcgtgccctcgctctccagcagcgtcactctcaccttacagatatcagatgtgaacgac
aacgcgcctgtctttgagaggagctcatatgaggcctacattatagaaaacaacacaccg
ggcctctctatattcacagtggaagccagagacgctgactggaaccagaatgcccgtgtt
tcttacatactggaggactcctcggttaacggagtgcccgtctcctcatatgtgtccgtt
agtgctgatagtggagtcatacatgcagtgcgctcttttgactacgagcagatcaaggat
ttccagttccgcgtaaaagcgcaggatggaggctcccctcctctcagtagcaatgtgact
gtgaaaataatgatccaggaccagaacgacaacgcgcctcaggttctgtacccagtccag
actagcagctctctggtggctgaaatggtgcctcgttcagcagatctgggctatcttgtt
actaaagtggtggctgttgatgtggactctggacagaatgcctggctctcgtataaactg
cagaaagcgacagacagggcgctgtttgaagtgggttcacagaatggggaaataagaacc
gtacgccaagtcaatgataaagatgctgtgaaacaaaggctcactgttgtagtggaggac
aacgggcagccctctcgttcagctacagtcaatgttaacgtggcggtggcggacagcttc
cctgaagtgctctcggagttcactgactttacgcacgacaaggaatacaatgacaacctg
actttttacttagtcttggctttggctgtagtctcatttctgttcatcacatgtttagtg
gttattatatcagtgaaaatatacagatggagacagtctcgcatcctctatcattccaac
ctcccggttattccgtattatccaccgcgttacgcagacactttggggacaggaactcta
cagcacgtgtacaattacgaggtgtgcaggacgactgactccagaaagagtaactgtcag
ttcgccagaccctgtagtcagaacgttctgataatggaccccagttctacagggacgatg
cagcggatgcagagtgaaaagaacatcctggatgaaccagactcaccaatagagcaccac
agtcacggacagcggcgctttgcaaatagggtgacttgccttgtagctgaattctcgttg
atggtaaagataataccgtcctttaaagatcaatcaaacatatcctttgtatttcataac
attcatgataggctacgggtattccatgcacaacattccatccatttcctgtttaacctg
caagtctaa
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