Salmo salar (Atlantic salmon): 106604959
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Entry
106604959 CDS
T04363
Name
(RefSeq) fragile X mental retardation protein 1 homolog B-like
KO
K15516
fragile X mental retardation protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106604959
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106604959
Factors involved in mRNA localization
Other mRNA localization factors
106604959
mRNA cycle factors
Stress granule specific factors
106604959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
DUF7636
Motif
Other DBs
NCBI-GeneID:
106604959
NCBI-ProteinID:
XP_014055611
UniProt:
A0A1S3RTI5
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All DBs
Position
ssa05:complement(42020214..42030397)
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AA seq
592 aa
AA seq
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MDELAVEVRGTSGAFYKGYLKDVHESAVTVSFENNWQPERQIPFHDVRFPPPTGFQKEIN
ESDEVEVCAVYSRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLNEIVTLERLRPVNP
NKTATKNSFLKIHLDVPEDLLQMCSKDSHKDFKKAVGAFNVTYDSDKRQLVILSVNEITT
KRAQMLSDMHFRSLRTKLSLMQRNEEASRQLESSRQLASRFHEQFVVRDDLMGLAIGTHG
ANIQQARKVPGVTTIDLDEETCTFHIYGEDQEAVRKARSFLEFSEDVIKVPRNLVGKVIG
KNGKLIQEVVDKSGVVRVRIEAENDKKPPPVDEGMVPFVFVGTKESISNAKVLLDYHLNY
LKEVDQLRMERLQIDEQLRQIGGGGPRAPGTGRPDNKIFIVDNGGLGMMGMGSQRGGKPF
SRGGGGRGRRGGPSFTSGTNSEASNASETESDHKDELSDWSLAPTDELTGGFPKRPDTRK
RGGGGPRGRGGRGRGGGGFKAEDIQWTESRSRNTRDPKLRPQEDSLQIRVDSNNERSVHA
AARGPPGPAGDGTVPGANRQRPIKERPIKKEKQEGPSGESTAVPPVVVNGVS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctagcggttgaagtcagggggacgagtggggctttttacaagggatatttg
aaggatgttcatgaaagtgctgtcaccgtgtcctttgaaaacaattggcagccagaacgt
caaattcccttccatgatgttcgatttcctccacccacaggttttcagaaagagataaac
gagagtgatgaagttgaggtatgtgctgtttattctagggctaatgataaagaaccatgt
gggtggtggctggcgaaggtccggatggtgaagggagagttttatgtcatagagtatgca
gcttgtgatgccacgctcaatgaaatagtcacattagagaggttacggcctgtcaaccca
aacaagacagctacaaaaaactccttcctgaaaattcacctagacgtcccagaggacttg
ctgcaaatgtgttcgaaagactctcataaagattttaagaaggcagtgggagcattcaat
gtcacttatgactcagacaaaagacagcttgttattctgtctgtgaatgagattacaacc
aaaagggcgcagatgctgagcgacatgcatttccggagcctgcgcaccaagttgtcccta
atgcagaggaacgaggaggctagccgccaactggagagctctcggcagctggcatctagg
ttccatgagcagtttgtggtacgagatgacctgatggggctggccatcgggacccatggt
gccaatatccagcaggccaggaaagtacctggggtcaccaccatagacctggacgaagag
acctgcaccttccacatctatggcgaggatcaagaggcagtgcgcaaggctaggagcttc
ttggaattttctgaagatgtcatcaaagtaccaaggaatttagtggggaaagtcattggg
aaaaatgggaagttgatccaggaagtagtggataaatctggtgttgttcgagttcggatc
gaggctgagaacgacaaaaagccacctccagtggatgagggcatggtgccgtttgtcttt
gtgggtacaaaggaaagcatttccaatgctaaagtactgttagactatcatctcaactat
ctgaaggaagtggaccagctgcgcatggagcggctgcagatagatgagcagctgaggcag
attgggggaggaggccccagggccccggggactggacggcctgacaacaagatcttcatt
gtagacaacggtggcctgggcatgatgggcatgggctcccagagaggagggaagccgttc
agcaggggaggaggaggccgtggccgacgcggtggcccctcttttacctccggcaccaac
tctgaggcttccaatgcgtctgagacagagtcggaccacaaggacgagctgagcgactgg
tctctggcccccactgacgagctgacagggggcttccccaaacgacccgatacacgcaag
agagggggaggagggcctcgtggacggggagggagaggaagaggagggggaggcttcaaa
gctgaagacatccagtggactgagtcacgttcacggaataccagagaccctaagctaagg
cctcaggaagattctttgcagatccgagtggacagtaacaatgagaggagtgtgcatgct
gcagccagaggtccccctggccccgcaggcgacggaactgtccccggagcaaaccgacag
agacccatcaaagagcgacctatcaagaaggagaagcaggagggccctagtggtgaatcc
accgctgtgcccccggtggtggtgaacggggtgtcgtag
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