Salmo salar (Atlantic salmon): 106605009
Help
Entry
106605009 CDS
T04363
Name
(RefSeq) transcription factor HIVEP3-like
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106605009
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106605009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_4
NOA36
zf-C2H2_16
zf-met
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
106605009
NCBI-ProteinID:
XP_014055676
UniProt:
A0A1S3RTQ4
LinkDB
All DBs
Position
ssa05:45090772..45181950
Genome browser
AA seq
1867 aa
AA seq
DB search
MEAEPSHPADGERSGRQQQPLSAGAAESPTGSHPQQPPSNPRPVHGGLGRLHHRKPKRSD
LLLRLQHQHKTQAAAWQHSTDTPGPSGGSIPSISSLQSSSTQGHNTHGVQSQPNQEAPEG
SPSKRGERKPQKPGKYVCTYCGRPCAKPSVLQKHIRSHTGERPYPCVPCGFSFKTKSNLY
KHRKSHAHRIKAGLASSRDELSLSGLAMSAPGEDPEEPTEGESTDSEEESGQYRKEKLGK
QKSSSSLVLLGQEEGQRSDNSQAVKQRLAMRLSERKRGPMASPEAPPSSSTSSSLGPSSK
GSQESGYFSLSRSTEMSRADSQVSPPTAKTYAEIILGKYGRLGGQQRGPHQQHTHSSSPG
MEEKSSMPFSMPKTQVIEHITKLITINEAVVDTSEIDSVKPRRSLLSRKSSLELPKFSCP
KYPYMFEPKGEIPGPSMAGQSFFPHVQDVDPSGVQESSSSVPLLRSHSMPTSAGQGNHST
TSPWGFCRLSHSFDEQQAVVAEMRVGGQHRLLRRQPAIEVPLGAELSLEEAGPSYAATES
GLTRKQQQQQRKGPRLYECKACGVRCKQRESYEAHRGLCTGQPIKELERGEVDGACRDDR
PQMMHYKFRALAMAVRKRRKEESLEEDPPSPEPTAVVTCSPATTTAVPSLVEQSEAFSGA
LSQTEQQQQDRKGISVIQHTSSFEKQESISMESQESIELRESQSTLQKQPLPKSSPSMSR
LVRQHNIQVPEILVTVEPDADMVPVSPTATTCLSKEPERVVEEFQWPQRSQSMAQLPAEK
LPPKKKRLRLAEAAAQSASAWRERRKCLLVKHATLGEPDHEEGAMASHSGRPGSPKPGPS
YTSHPALHPAEASTSRLSPEAIGKTVQLFHQPRIPPFPMQPTGHDRFPLGQIAQLHPVTT
AISDVLSTHIIHRAFLHTHPSPPTIQVHPGQLHMAECLGLPLHPFSALLSLQYPTGPDEN
VYFPVSPGLTIQVSTQPPIPPTVVLPSPSPQSLVPLPCLHPPPVIATCLAQLMPVVSLVV
PVRLQTHMTTYASALYTTLSQILASARSQEPICCMAMVIMGQLEQDKLQRAYLKIPTPDF
KSYLPLSLPLELGSVSREGYGPLGAGGSKRMLSPAASLELSTEAQRQQKRVKEEEVEEEK
VGEEEENKGTGRKLEAGEDEEKEPERAQIGVVTVKVEEEEKVRDPEGHREEREMQGKAEP
KKEKGREENEGQGVSASFVPQSPERAKAPSYTSLHTTTSVSWCYLNYVKPNPSAQRESQT
SVYTSWSVSVHNPNLPGLSTKLALSLLSSKQKHSLETYTMATALTPATGKVVSASSRKTY
ISEVHAIPPSTPVEVKEPPQQPEEEEKGKREEQGPSTSKQSEPLCVQIFEGGYKSNEEYV
YVRGRGRGKYVCGECRIRCKKPSMLRKHIRTHTDLRPYICKHCNFAFKTKGNLTKHMKSK
AHGKKCQSMGTSGSSLDEPETEEAGGIEEHLSGFEDQDEHQCSDVDDSEEDDDEEESSSH
DEPPSSCSSDRSLSTRGHSSSGRRSQQGTPDPSAPEPQLDPSPWPSQELSPTRRLWHSGH
ASSPESRRALFSRRGWDTSLRAFSPSSESSPIQSLSPRRELDSHNRHLSPSPKRGPSPIR
ALSPLYSMRPLSPLRPMSPSQYRMLWAPASPSPLGVQHRPCSSPSRLPWDSDRIQVGSME
RIGTPSEGQIGPEPCLSFPPAFRLSPSDSPKAQSQSRDCIFSHLPLHSQQARVTYLMIPI
GGIQMVQARPHSHPTTPTSASSPPMERLLLGQTRREAPWCRTPRTQGLRTPGDHWSDSQE
VVGASQSGLCIPSFTPPIRSKPSISQQGRIDPGMINTKQYDSSSHSHRSEAETRERWPSH
GQAGPST
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagcccagccatcctgctgatggtgagcgatccggaaggcaacagcagcct
ctgtctgctggggccgctgagtcccccacagggtcccatccacagcagccgccatccaac
ccccgccccgtccacggtggcctgggacgcctccaccaccgcaagcccaagcgtagcgac
ctgctcctcaggcttcagcatcagcacaagacccaagcagcagcatggcagcactcaaca
gacaccccaggtccttcaggaggcagcatcccctccatctcatccctacaatcctcctct
acccaaggccataacactcatggggtccagtcccagcccaatcaggaagccccagagggc
agcccatctaaaagaggtgagaggaagccccagaaaccggggaagtatgtgtgcacttac
tgcggccgtccatgtgccaaacccagcgttctccagaaacacatccgctctcacacaggg
gagaggccttacccctgcgtcccctgtggcttctccttcaagaccaagagtaacctgtac
aagcaccgcaagtcccacgcccaccgaatcaaggcaggcctggcgtccagccgggacgag
ctgagcctgagcggacttgcgatgagcgccccgggagaggatcccgaggagcctacagag
ggggagagtacagactctgaggaggagtcgggtcagtacaggaaggagaagttgggcaag
cagaagagtagcagcagtttggtgctgttagggcaagaggagggccagaggtctgacaac
tcccaggccgtgaagcagagactggccatgaggctgagtgagaggaagcgtggccccatg
gcctccccagaagcccctccctcttcctccacctcctcctcactgggccccagtagtaaa
ggcagccaagagtcaggctacttctccctttcgaggagcactgagatgagccgagctgac
tcccaggtgagccctcccaccgccaaaacctatgccgagatcattctgggcaagtatgga
cggcttggagggcagcagcgcggtccccatcagcagcacacccactcttcttcaccaggg
atggaggagaagagtagcatgcccttcagcatgcccaagacgcaggtcatcgagcacatc
accaaactcatcaccatcaacgaggcggtggtggacaccagcgagattgacagcgtcaag
cccaggcgctccttgctctccaggaagagtagtctggagttacccaagttctcctgcccc
aaatacccctatatgtttgagcctaagggagaaatcccaggccccagtatggcaggccaa
tcattctttccccatgtccaagacgtggacccatcgggggtccaggagtcttcctcttca
gtgcctctgctgagaagccactccatgcccacctcagcaggccagggaaaccactccacc
acctctccctggggcttctgtcgtctgagccactcctttgatgagcagcaggctgtggtg
gccgagatgagggtgggcgggcagcaccgtttgctgaggcgccagcccgccatcgaggtg
cccctcggggctgaactcagcctggaggaggctggcccctcctacgcagcaacagaaagc
ggcctaaccaggaagcagcaacagcagcaacgcaaaggtccaaggctctatgagtgcaag
gcctgcggagtccgctgtaaacaaagggagagttacgaggcccacaggggtctttgcaca
ggccagccaataaaggagctggagagaggagaggtggatggggcgtgccgggatgaccgt
ccccagatgatgcactataaattccgggcactggccatggcagtgaggaagaggaggaaa
gaggagagtctggaggaggatcctcccagccccgagcctacagctgttgtgacctgcagc
cccgcaaccaccactgcagtgccaagcctggtggagcagagtgaggccttctcaggtgct
ctctcacagactgagcagcagcagcaagacaggaagggtatctctgtcatccagcacacc
agctccttcgagaagcaggaaagtatatccatggagagccaggagtctatagagctcaga
gagagccagtcaacactgcaaaaacagccgctgccaaaatcatcgccctccatgtcccgc
ctggtccgccagcacaacatccaagtgccagagatcctagtgacggtggaacctgacgct
gatatggtgccagtgtcgcccacggcgacgacatgcttgtccaaggagccagagagagtg
gtagaggagttccagtggcctcagcgcagccagagtatggctcagctccccgccgagaag
ctgccaccaaagaagaagcgtctccgtctagccgaggctgctgcccagtctgcatcagcc
tggagggaaaggaggaagtgcctacttgtgaagcacgccaccctgggtgagccagaccac
gaggaaggggccatggccagccactcgggccgaccagggagccccaagccaggcccgtcc
tacaccagccaccctgccctccacccagctgaagccagcacctcgaggctcagcccggag
gccatagggaagaccgtacagctgttccaccagccccggatacccccattccccatgcaa
ccaactgggcatgatcggttccctcttggccagatagcccagctccacccggtcaccact
gccatctcagatgtcctctccacccacatcatccacagagccttcttacacacacaccct
tctcctccaaccatacaagtccacccagggcagcttcacatggcagaatgcttaggcctg
cccctccatcctttctcagctctgctctccctgcagtaccccaccgggcctgacgagaat
gtgtacttccccgtttcccctgggctcaccatccaagtctccacacagccccccataccc
cccactgtggttctcccgtccccatctcctcagtccttagtccccctaccttgcctccat
cccccgcctgtcatcgcaacgtgcctggcgcagctgatgccagtcgtgtcactggtggtg
ccagtgcgcctccagacccacatgaccacctatgccagtgccctgtacaccaccctatct
cagatcttggcgtcagcccgctcccaggagcccatctgctgcatggccatggttatcatg
ggccagctggagcaggacaagctgcagagggcctatctaaagatccccaccccggacttc
aagagctacctgcccctgtctctgcccctggagctgggctctgtgtccagggagggctac
gggccactgggggctggagggagcaaacgcatgctctcccctgcagccagtctggagctt
agcacagaggcccagcgtcagcagaaacgagtgaaggaggaagaggtggaggaagagaag
gtgggagaggaagaggaaaataagggtactgggagaaaactggaagcaggggaggatgaa
gagaaagagccggaaagggcacagataggagtagttactgtgaaagtcgaggaggaagag
aaggtacgggacccagaggggcacagggaagagagggagatgcaagggaaggctgaacct
aagaaagaaaaggggagggaggagaatgagggccagggagtgagtgcttcctttgtaccc
cagagtccagagcgagccaaagccccctcgtataccagcctccacacaaccacctcagtc
agctggtgctacttgaactacgtgaagcccaacccgtctgcccagagggagtcacaaacc
tccgtttacacctcctggagcgtcagcgtgcacaaccccaacctgccaggcctgtccacc
aagctggccctgtccctgctgagctccaagcagaagcacagcttggagacctacaccatg
gccacagctctaacccctgcgacaggcaaggtggtctctgccagcagcagaaagacctac
atttcagaggtacatgctatcccacccagcacccctgtcgaagtgaaggagccaccacag
cagcctgaggaggaggagaaggggaagagagaagagcaagggccctccacctccaaacag
agcgaacctctctgcgtccaaatcttcgagggcgggtacaagtctaatgaggaatatgtg
tatgtgcggggtcgcggcagaggaaagtatgtctgcggagagtgcaggatccgctgtaag
aagcccagcatgctaaggaagcacattcgaacacacacggatctccggccctacatctgc
aaacactgcaacttcgccttcaaaaccaaagggaaccttaccaagcacatgaagtccaag
gctcatgggaagaagtgccagtcaatgggaacgtctgggtcttcactggacgagccagag
accgaggaagcaggaggtattgaagagcatttgtctgggttcgaggaccaggatgagcac
cagtgctctgacgtggatgattcagaggaggacgatgatgaggaagagtcctcatctcac
gacgagccgccctcatcctgctcctccgaccgcagtctgtcaacaagggggcattccagc
agcggaagacggtcccagcagggcacgcctgacccctcagccccagaaccccagctagat
cccagcccctggcccagccaggagctctctcccacccgtagactgtggcacagcgggcat
gcttcctctccagaaagccggagggcactgttctcccgccggggctgggacacctccctc
agggccttctcccctagcagtgagagctctcccatccaaagcctttcccccagacgggag
ctggactcccacaaccgacacctctcgccctcccccaagagaggaccatcccccatcaga
gctctatcccccctgtactccatgcggcctctctcccctctccggccgatgtcccctagc
cagtatcggatgttgtgggctcctgcctctccctcgcccctgggggtgcagcatagacct
tgcagctcacccagtcgtttgccatgggacagcgatcgcatacaggtgggttcaatggag
aggataggaacaccaagtgaagggcagattggtccagagccctgcctgtcattcccccca
gctttccgtctgtcccctagtgacagccctaaagcccagtcccagtccagggactgcatc
ttcagccacctgcctctgcactcccagcaggccagggtgacctacctgatgattcccatt
gggggcattcagatggtgcaggctcgtccccactcccaccccactacccccacctcggcc
tcctctcccccgatggagaggcttctactgggccagaccaggagggaagccccctggtgc
aggacccccagaactcaagggctcagaactcctggggaccactggtcagacagccaggaa
gtagtaggagccagccaatcagggctgtgcattcccagttttaccccacccatacgttcc
aaaccctccatctcgcagcagggtaggatcgacccagggatgataaacacaaagcaatat
gacagctcctcccactcacacaggtctgaggcagagaccagagaacgatggccctcacat
ggccaggcaggaccatccacctag
DBGET
integrated database retrieval system
