Salmo salar (Atlantic salmon): 106605011
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Entry
106605011 CDS
T04363
Name
(RefSeq) transcription elongation factor A protein 3-like
KO
K03145
transcription elongation factor S-II
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106605011
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106605011
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
106605011
NCBI-ProteinID:
XP_014055687
UniProt:
A0A1S3RV22
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Position
ssa05:complement(45351520..45388469)
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AA seq
762 aa
AA seq
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MTREEELIRIAKKLDKMVSRNNTEGALDLLNELKGFNMTLKLLQETRIGMSVNGIRKHCT
DDEVVSLAKILIKDWKRLLDAARTQSTERPNEMKNGVDSNKSTGFPVRSPLEKDTSHKRL
DVSDSDPESEKKEYSDKRRKEKHNVEHKKDERAVDLKKERYTEAFKNKRHAEQSKNGKHT
EDARKERHVEHLKEPKKERHFEKSRKERHVQEPKNESHTDEPRRESYKDELRKERHTEER
RKEIPMYEPPQERPEENHRQGFERRSVLDDLYPSCYSPPRPPRPPRLPPLVRRMSAEVNK
GVKKEVKKERERRDSSDTLSPSHPRPIPPSRRPSVKVKKERKKAPPDPNSPLPPLHPRPS
MPTAAEVKKERKEPPRISVVRKEPPDPNAPFAPLPLHLHPPPPVKRPSVEVKKEREESSD
YKPVSLKVTSSDHVKKDRKDSDTKVPQKTSVDAKKERKDLSDSKPKPAKRQSLDSSDSNP
KRSKRPSLDGKKDRKDSTDSKPSHSVKRHSTDSKSDRRDSVDSKTSNSPSAKKLSSETKE
FHGSKSSHPGPLQRKSSTDSIERRGKPEMPKIPTTPTSPMSPSFSSAGVPLSPCLATGET
IRDKCIEMLAAALRTDDNFKEFGTNCDSMAAEIEDHIYTEMGSTDMKYKNRVRSRISNLK
DPKNPGLRRNVLAGGIELRRFAIMSAEEMASDELKQLRNNLTKEAIREHQLSKTSGTISD
LFQCSKCSKKNCTYNQMQTRSADEPMTTFVLCNECGNRWKFC
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagaagaggagttaattcggattgcaaaaaagctggacaagatggtgtctaga
aataacacggagggtgccctggacctgctgaatgaactgaagggcttcaacatgacgctg
aaacttctgcaggaaacgaggatcggcatgtctgtgaatggaatcaggaagcactgcaca
gacgacgaggtcgtttccctggccaagatcctcatcaaggactggaagagactgttggat
gctgcacgtactcagagtactgagaggcccaatgagatgaagaatggggttgactccaac
aaatccacagggttcccagtcaggtcccccttagagaaagacaccagtcacaagaggctg
gatgtttctgattcagatcctgaatctgaaaagaaagaatactctgacaaacggcgaaaa
gagaagcacaatgttgaacataaaaaagacgagagagctgttgaccttaaaaaggagcga
tacacagaggcattcaaaaacaaacggcatgcagaacaatccaaaaatggaaaacataca
gaagatgccagaaaagaaagacatgtagaacacttaaaagaacccaaaaaggagagacac
ttcgaaaaatccagaaaagaaagacatgtgcaagaacccaagaatgagagccacacagac
gaacccagaagggagagttacaaagatgaactgagaaaggaaagacacacagaggaacgc
aggaaggagataccaatgtatgaacccccacaagagagacctgaggaaaaccacagacaa
gggtttgagaggagaagcgtcttggatgatctttacccctcttgttactctcctcctcgg
cccccccgaccaccccgtcttcctccccttgtcagacgtatgtctgcggaggtgaataaa
ggggtgaaaaaagaggtgaagaaggagagagagaggagagattcttcagacactctgtct
ccttctcatcctcgtcctatccctccgtccagacgtccctcagtgaaggtgaagaaagag
aggaaaaaagctcctcctgaccctaattccccgcttcctcctcttcatcctcgtccttct
atgcccactgcagcagaggtcaagaaggagagaaaagagcctccacggatttctgtggtt
agaaaagagcctccggaccccaatgctccatttgctcctcttcctctccatctccatcct
ccccctcctgtgaagcgcccgtcagtggaggtcaaaaaggagagagaagagtcgtcagat
tacaaacccgtttctctgaaggtgacgtcatctgaccatgtgaaaaaggatagaaaagac
tccgataccaaagtgccccaaaaaacatcagttgatgccaagaaagaaagaaaggatttg
tcagattccaaaccaaaacctgctaaaaggcagagtctggactcctcagattccaatcca
aaacgttctaaaaggccaagtctggatggcaagaaagacagaaaggactccactgactcc
aagcccagccattctgtgaaacgtcattcgactgactccaaatcagacaggagggactct
gtggattccaagactagcaactcaccctcagctaagaagctctctagtgagacgaaagaa
tttcatggctccaagtcctctcaccctggccctctgcagagaaagtcctcaacggacagt
attgaacggagagggaaaccagagatgccaaagatccccaccacccccaccagtcccatg
tccccctccttcagctcagcaggggttcccctgtccccttgccttgccactggagaaacc
atcagggacaagtgcatcgagatgctggctgctgctctacgtacagatgacaacttcaaa
gaatttgggacaaactgtgactccatggcagcagagattgaagatcatatttacacggag
atgggatccacagatatgaagtataaaaacagggtgcggagccgcatcagcaacctgaag
gaccccaaaaaccctggactgcggaggaacgtcctggctggaggcatcgagctgagacgc
tttgccatcatgtctgctgaggagatggctagtgatgagctgaagcagttgaggaacaat
ctgactaaggaggccattagggaacaccagctgtccaaaaccagtggtaccatttctgac
ctgtttcagtgcagcaagtgcagcaaaaagaactgcacctacaaccagatgcagacccgc
agcgctgatgagcctatgactacttttgttctgtgtaacgagtgcgggaaccgctggaag
ttctgctga
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