Salmo salar (Atlantic salmon): 106605338
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Entry
106605338 CDS
T04363
Name
(RefSeq) sterol regulatory element-binding protein cleavage-activating protein-like
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106605338
Membrane trafficking [BR:
sasa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
106605338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
WD40_Prp19
WD40_CDC20-Fz
Patched
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
106605338
NCBI-ProteinID:
XP_014056314
UniProt:
A0A1S3RWY5
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All DBs
Position
ssa05:complement(57342626..57376068)
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AA seq
1310 aa
AA seq
DB search
MAMDCIGSNDAFKLGILGSVVRRSLDAPRHSVLARPPDGRQLTPPPRMTVRERLREKISA
AFYRHGLLCASYPVPIILFTSASILACCYPLLRLPLPGTGPVEFTTRVRDYTVPSHEPQG
DLGERPDWYRGPPVAYIQQVLVKAAVSPWDSTLVPVDVFRSPLGRVFSLLEEIRNHVHND
GSGVKSLEALCLQVTDLLPGLRRMQTVLPEHGCLLVSPGNYWQNQRELFDSDPDLLKTVH
QHEPKGLHTSATLRDLLFGVPVKHTGVSLYSRKRVVTYTITMVLGSYDARFLSSLRARLL
QLHPSVNCSLREDHMVHVHFKEEIGMAELIPLVTTYIILFAYIYFSTRKIDMVKSKWGLA
LAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTPVDLE
VKLRIAQGLSNESWSIMKNMATELCIVLIGYFTLVPAIQEFCLFAVVGLVSDFFLQMFFF
TTVLSIDIRRMELADLNRRLPAEAGMPPPKPGPLRPREAPPPPRPSPYTITLQTPAFRNL
RLPKRLRVVYFLARTRLAQRFIMVGTVIWIGILAYTDPAGLRTYLAAQVSEQSPLGEGGA
GGLPPHLGVAPVFPGPGGDPASTLSVLPAPAEPTPLPENQSQGHHGAPREGVPHQAQAPP
LVPQISWGAEDEEGWRRLSFRHWPSLFSYYNITLAKRYISILPVIPVTLHLSPREAIETR
HPQDTRHPPPPSLKTNELPADLTLYKVAALGLAAGVLLVLLLFCLYRVLCPRNYGQNGVV
HGRRRRGDLPCDDYGYSPPISEISPLLLRGHSMDIECLASDGMLLASCCLAGQIRVWDAQ
TGDCLTVIPKHGLRRSSSSGCWEQRDGWDAVGVAEPENLGGGTESEGGVFDEDEGYPLRR
RTTPRPALFEDQPDLTPLIDTNFDSQPPSHLLLTPPRDGFDFGGLVEKAYLEHEPPSPGL
TASYPSPSPPSGPPPQRRRSLGYIQPPAPQGQGTPDWESAVWAMELRGNLIAAGRSSGKL
ELWDAVEGSLRCSNEDGVSGITALAFLNNRIVAARLDGSLDFFTVDINKPLGLLQYRGPP
GRSNMLPSPCYSSEDVISCQLTRSVQCAHQKPITVLRAAAGRVVTGSQDHTVRVYRLEDS
CCLFTLQGHSGGITAIYIDQTMVLASGGQDGAICLWDVLTGSRVSHVYGHRGDVTSLVCT
TSCVISSGLDDLICIWDRSTGIKLYSIQQEVGCGASLGVISESLLVTGGQGCVSFWDLNF
GDLLQTVYLGQSSDGQGVRQLVVLNNAAIVCDFGSELSLVYVPSVLEKLD
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggactgtataggatccaacgatgccttcaaactggggattttaggaagcgtc
gttaggaggtccctggatgccccacggcactccgtcctcgcccgcccccccgatggccgg
cagctgaccccgccccccaggatgacggtgagagagcggctgcgagagaagatctcggcg
gcgttttaccgccatgggctgctttgcgcttcctatccggtgcccatcatcctcttcaca
tccgccagtattctcgcctgctgttaccccctgctgcggctgcctctcccggggaccggg
ccggtggagttcaccacacgggtccgagattacaccgtcccttcccatgagccccaggga
gacctcggcgagcggcctgactggtatcggggtcctccggtggcctacattcagcaggtc
ctggtgaaggcagcagtgtctccctgggacagtacgctggtccctgtggacgtgttccgc
tccccactgggccgcgtattcagcctgctggaggagatccgcaaccatgtacacaacgac
ggttctggggtcaagagcttggaggcgctctgcctgcaggtgacggacctgttgccgggg
ttacggcgtatgcagacagtgctgccagagcacggttgtctgctggtctcccccggcaac
tactggcagaaccagcgggagctgtttgactctgaccccgacctgctgaagaccgtccac
cagcacgaacccaaaggactgcacacctcggccacactgagagacctgctgtttggcgtc
ccggtgaaacacacaggggtgagtctgtacagcaggaagagggtggtcacctacaccatc
accatggtcctgggcagctacgacgccaggttcctgtctagcctgcgggcgcgtctcctc
cagctgcacccctcggtgaactgcagcctgcgcgaggaccacatggtgcacgtgcacttc
aaggaggagataggcatggccgagctcatcccgctggtcaccacctacatcatactgttc
gcctacatctacttctccacacgtaagattgacatggtgaagtcaaaatggggcttggcg
ctggctgccgtggtaacggtgctcagctctctgcttatgtctgtggggctctgcaccctg
ttcggcctgacgcccacactcaatggaggtgagatcttcccctatctggtggtggtgata
gggctggagaacgtcctggttctcaccaagtctgtggtgtccacccctgttgacctggag
gtcaaactacgcatcgctcagggccttagtaatgagagctggtctatcatgaagaacatg
gccacagagctgtgcatcgtcctcataggatatttcaccctggtgcccgctatccaggag
ttctgtctgtttgctgtggtgggtctggtgtctgacttcttccttcagatgtttttcttc
accacagttctttccattgacatccgacgcatggagttggccgatctgaaccggcgtctt
ccagccgaggcagggatgccccctcccaaaccgggccccctgcgccctcgggaggcgcct
cctcccccacggccctcgccctacaccatcaccctgcagacgcccgccttcaggaacctg
cgtctgcccaagaggctccgtgtggtctacttcctggcccgcacgcgtctggcccagcgc
ttcatcatggtgggtacagtgatctggattggcatcctggcctacacggaccccgctggc
ctccgtacctacctggcagcccaggtgtctgaacagagccccctgggggagggtggggcc
gggggtctgcccccccacctgggagtagccccggtcttccctggaccaggaggggacccc
gccagcaccctcagtgtcctccctgcccccgctgaacccaccccgcttccagagaaccag
tcccagggccaccacggggcccccagggaaggagtaccccaccaggcccaggccccaccc
ctggtgccccagatcagctggggggcggaggatgaggagggctggaggaggctgtctttc
agacactggccctcgctcttcagctactataatattactctggccaagagatacatcagc
atcctgcctgtcattcctgtcacgcttcacctgagcccccgggaggccatcgagacgcgt
cacccccaggacacacgccaccccccgccgcccagcctcaaaactaacgagctgcccgca
gacctcacgctctacaaggtagcagctctgggcctggcggcaggggttctgctggtgctg
ctgctcttctgtctctaccgggtcctctgtccccgcaactacggccagaacggcgtggtc
cacggccgccggcgccgtggtgacctgccctgcgacgactacggctactcgccacccatc
agcgagatctcccccctgctgctgcgtggacacagcatggatatagagtgtctggcgagt
gacggcatgctgttggccagttgttgtctggcaggacagatccgtgtgtgggacgctcag
actggagactgcctcactgtcattcctaaacatgggctgcggcggagtagcagcagtggc
tgctgggagcagcgggatggctgggacgccgtgggtgtggccgaacctgagaatctggga
ggcgggacagaatcagagggcggggtttttgatgaggatgagggctaccccctcaggcgg
cggaccaccccacgtcctgccctctttgaggaccaacccgacctcacccccctcatcgac
accaacttcgactcccagcccccctcccacctccttctcaccccgcccagggatggcttt
gacttcggggggctggtggagaaggcctacctggagcacgagcctccctcgccgggcctc
actgcctcctacccctccccctcacccccgtcgggaccccctccccagaggagacgcagc
ctggggtacatccagccccctgctccacagggccaggggaccccggactgggagagcgcc
gtgtgggccatggagctccgggggaacctcatcgctgctgggaggagcagcggcaaactg
gagctgtgggacgcagtggagggctcgttacgctgcagtaatgaagacggcgtctcaggg
atcacggccctggccttcctcaacaacaggatcgtggcggccagactcgacggctcgcta
gacttcttcactgtcgacatcaacaagcctctgggcttactgcagtacagaggtcccccc
gggcgtagtaacatgctgccctcgccctgctacagcagtgaggatgtgatctcatgccag
ctgacgcgctcggtgcagtgtgcccaccagaaacccatcacggtgctgcgagccgcggcc
ggcagagtggtcacgggcagccaggaccacaccgtcagggtgtatcgtctggaggactca
tgctgtctcttcacgctccagggccactctgggggaatcactgccatctacatagaccag
accatggttctggccagtggggggcaggacggagcaatctgcctgtgggatgtgctgacg
ggcagccgggtcagccacgtgtacggtcaccgcggcgacgtgacctcgctggtgtgcacc
acatcgtgcgtgattagcagcggcctcgacgacctcatctgcatctgggaccgcagtacg
ggcatcaagctctactccatacagcaggaggtgggctgtggtgctagtctgggggtgatc
tctgagtctctcctggtgacagggggtcagggctgtgtgtccttctgggacctgaacttc
ggagacctcctccagacggtctacctgggccagagcagcgacggccagggggttcgccag
ctcgtggtgctgaacaacgccgccatcgtctgcgactttggctccgagctcagcctggtc
tacgtaccttcggtgctggagaagctggactga
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