Salmo salar (Atlantic salmon): 106605348
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Entry
106605348 CDS
T04363
Symbol
prdm1
Name
(RefSeq) PR/SET domain 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106605348 (prdm1)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
106605348 (prdm1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-met
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
106605348
NCBI-ProteinID:
XP_014056343
UniProt:
A0A1S3RVM6
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Position
ssa05:57733493..57749796
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AA seq
834 aa
AA seq
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MCGWDQSFSATSHSSAMLTTEGAHTVEHDVVKMDTEPHRDTETQMDTGSKMATDTDSKME
EADMMMWTEAEFEEKCTYIVKDTPREAGTESEGLTRAEASLPRNLAFKQLADSKEVIGVA
SREYIPKGTRFGPLVGQVYTADSVPKDANRKYFWRIYSEGDFHHFVDGLDEERSNWMRYV
NPAHSAGEQNLAACQNGTNIYFYTVRAIPPGTELLVWYCPEFAHRLHYPPSGELMMQKLK
QSLLEAKQQASEEHVSSSSPVKIEHSVSSILRGPTTSSKREPSRPLATRPRCADSPERPL
YPRALYPPFCPHPHLTEEFLSLKTSPVQFGYTTIRSPGNQSSATPSPSARSSPESSPHGS
PAAPQPTPPSSSFYPRGLGPFPGYSPPAAPLSSPFYPPVPHYSRYMLPHHYPLPGGGVPA
VGGMFPRMYPLFSSLLPHHMPLLPGEAGRRFLLPDSSHPSSFSTHRDFLLSAPTSAFSAA
TTLKDKAGPHYPNHPYPGHAHPHPHGHPHAPTSSSPTAGTAAPSERVPTKPTSALLGSAS
GRQEEEAMNLSKMKRGGGSTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVH
SGERPFKCSTCSKGFTQLAHLQKHFLVHTGEKPHECSVCHKRFSSTSNLKTHLRLHSGEK
PYSCKLCPAKFTQFVHLKLHKRLHSRERPHKCPHCHRHYIHLCSLRLHLKGYCLAAVTSS
GGPTPSPSTQEELQRINEEIERFDMSDHAERLDQLQGGVEVEAVLEKQVLGMLWREMDLK
TSGYHHHKGGASELQSTGCGLYNSVNETSVIKLRRSSPLLPSNVTIKQESEEQA
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctgggaccaaagcttctcggctacctctcatagctcggccatgttgactact
gagggggcccacactgtagagcacgacgtcgtcaaaatggacacagaaccccatagggac
acggaaactcagatggacacaggatccaaaatggccaccgacacagactctaagatggag
gaggcggacatgatgatgtggacggaggcagagtttgaggagaagtgtacctacatcgtc
aaggatactccgcgggaggcaggaacagagagcgaggggttaacgagagcagaggcctcg
ctgcctcgtaacctggccttcaaacaactagcggattccaaagaggtgattggagtggcc
agcagagagtacatccccaaaggaacacgcttcggccccctggtgggtcaggtttacact
gcagacagcgtccccaaagacgccaacaggaagtacttctggaggatctactcggagggc
gacttccaccactttgtggacggcctggacgaggagcgttctaactggatgcgctacgtc
aacccggcccactcggcgggggagcagaacctggcggcgtgccagaatggcacgaacatc
tacttctacacggtgagggccatcccccctggcaccgagctgctggtgtggtactgccca
gagttcgctcaccgcctccactacccgccctctggagagctcatgatgcagaaactcaag
cagtctctgctggaagccaagcagcaggccagtgaggagcatgtcagcagcagctcccca
gtcaagatagaacacagtgtctcctccatcctcaggggccccaccacctccagcaagagg
gagcccagccggccactggccacgcgaccccgctgtgctgacagccccgagcgacccctg
tacccccgtgccctctaccccccattctgcccccaccctcatctaacggaagagttcctg
agtcttaagaccagcccggtacagtttggttacacaacaatcagatcaccaggcaaccag
tcgtcggcgaccccgagtccgtcggcgcggagcagtccggagagtagcccccacggtagc
cccgcagctccccaacccacacccccatcctcctctttctacccccgaggtttgggtccc
ttcccaggctactctccgccagccgcccccctttcctcgcccttctaccctcccgtcccc
cactactcccgctacatgctaccccaccactacccactacctgggggtggggtgcccgct
gtcgggggcatgtttccaagaatgtacccgctcttcagcagcctgctgccccaccacatg
cccctgctgcctggggaggcggggagaaggttcttactgcctgactcctcccacccctcc
tcattctccacccacagggacttcctcctctccgcccccaccagtgccttctcggccgcc
accaccctcaaggacaaggccggcccccactaccccaatcacccctaccctggccatgct
catcctcacccacacgggcacccccacgcccccaccagcagctcccctacagcgggcacg
gcggctcctagcgagcgtgtgcccaccaagcctacctcagccctgctgggcagtgccagc
ggccggcaagaggaggaggccatgaacctgagcaagatgaagcgtggtggtggctcaaca
ggctacaagaccctgccttacccactcaagaagcagaacggcaagatcaagtacgagtgt
aacgtctgcagcaagaccttcggccagctctctaacctcaaggtgcacttgcgtgtccac
agcggtgagcgacccttcaagtgttcgacctgcagtaagggcttcacccagctagcccac
ctgcagaaacacttcctggtgcacactggagagaagccccatgagtgctcggtgtgtcat
aagcgcttcagcagcaccagcaacctaaagacccacctgcgcctccactcgggtgagaag
ccctactcgtgcaagctttgccctgccaagttcacccagtttgtccacctcaagctgcac
aagcgccttcactcccgcgagcggccacacaagtgcccccactgccaccgccactacatt
cacctgtgcagcctgcggctacacctgaagggctattgcctggctgccgtcacctcctca
ggtggccccacccccagcccctccacccaggaagagctccagcgcatcaacgaggagatt
gagcgcttcgacatgagcgaccacgctgagaggctggaccagctccagggaggggttgag
gtcgaggctgtcctggagaagcaggtcctggggatgctgtggagggagatggacctcaag
acctccggctaccaccaccacaagggcggcgcaagcgaactccagtctacaggttgcggc
ctgtacaattcagtcaatgagacgtcggttatcaaactgcgccgaagcagtccgcttctt
ccctccaacgtcacgatcaagcaggagtcagaggaacaggcttga
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