Salmo salar (Atlantic salmon): 106605401
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Entry
106605401 CDS
T04363
Name
(RefSeq) valine--tRNA ligase-like
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106605401
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sasa01007
]
106605401
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sasa03016
]
106605401
Enzymes [BR:
sasa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
106605401
Amino acid related enzymes [BR:
sasa01007
]
Aminoacyl-tRNA synthetase
Class I (U)
106605401
Transfer RNA biogenesis [BR:
sasa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106605401
Prokaryotic type
106605401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
GST_C
tRNA-synt_1_2
GST_C_2
Arc1p_N_like
GST_C_3
Val_tRNA-synt_C
tRNA-synt_1e
Jag_N
GST_C_7
Motif
Other DBs
NCBI-GeneID:
106605401
NCBI-ProteinID:
XP_014056475
UniProt:
A0A1S3RW26
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All DBs
Position
ssa05:complement(60823151..60839401)
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AA seq
1279 aa
AA seq
DB search
MASLYVSPHPDDFRSLMALVAAEFCPSRPCTLIEDPPASLALCSRPSLVLGSGGGEVLSG
ASAVAWYLASQGKRIGSNAKQESQVWQWLSFADNELTPVSCAVVFPLLGVMGVDKKSMQL
QQSSHAEMMRVLNVLDKNLEPRTFLVGDSLTLADIAVATAALLPFKYALEPSNRKALTNV
TRWFLTCVNQPQFVKVLGQISLCEKMVPVTPKPSVAVVPAANANPNADANAANGKPKTEA
QLKKEAKNREKLEKFQKKKEMEEKKKQEKKVAPPTEKKAKPEKKDLGVISYDIPTPPGEK
KDVLSPLPDSYSPQYVEAAWYSWWEKQGYFKPEYGRKSISEPNPRGVFMMCIPPPNVTGS
LHLGHALTNAIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMRERGMSRHDLGR
DQFIQEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRLHEDGVIY
RSKRLVNWSCTLNSAISDIEVDKKELTGRTLLPVPGYKDKVEFGVLVSFSYKIEGSDEEV
IVATTRIETMLGDSAVAVHPADPRYQHLKGKMVLHPFCDRKMPIVFDEFVDVNFGTGAVK
ITPAHDHNDYEVGNRHNLAFINILDENGLLINVPAPFLGMKRFEARKAVLQALKDRGQFK
ETKDNPMVVPVCSRSKDIVEPLLKPQWYVDCADMGKQAADSVREGRLKIIPDHHHKTWFN
WLDNIRDWCISRQLWWGHRIPAYFVTVTDPSVKPGEDMDGHYWVSGRTEEEARDKAAKRF
NVSTDKITLRQDEDVLDTWFSSGIFPFSIFGWPNETQDLSVFYPGSLLETGHDILFFWVA
RMVMMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLYAQLQD
SNLDPVEVEKAKQGQKSDYPTGIPECGTDALRFALCAYTSQGRDINMDVNRILGYRHFCN
KLWNAVKFAMRTLGDNFVPSEKAQLCGEESVSDRWILSRLCSAVGQCNAGFQAYDFPAIT
TAIYNFWLYELCDVYLESVKPVFSRAEEDSGSQSQAVVCRQTLFTCLETGLRLLAPIMPF
VGEELYQRLPRRQSQDGHPSIHVTPYPETEEFCWHSEDVDRQMEFVMTVVRTIRSLRADY
NLTKTRADCYLQCIDSGTISLVEQYSLQIQTLSLSQTIQPVPATGAVPEGCAVAIASDRC
TVHLMLKGLIDLEKEVAKLTVKKGELEKQMDKLREKMDKSDYKEKVPVKVQELDADKLRQ
SRTELEKATEAIDNFKRMV
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctctacgtctccccccaccctgacgacttcaggagcctcatggccctggtt
gctgcagagttctgcccctctcggccctgcacactcatagaggaccctcctgcctccctg
gccctgtgctctcgccccagcctggtgctgggctctgggggaggtgaggtgctctctggg
gccagtgctgttgcatggtacctagcctctcaggggaagaggatagggtcgaatgctaaa
caggagagccaggtgtggcagtggctcagctttgcagacaatgagctgactcctgtgtcc
tgtgctgtggtgttcccactgctgggggtgatgggagtggataagaagtccatgcagctt
cagcagagttctcatgctgagatgatgcgcgtgctaaacgttttagataagaacctggag
cctagaacattcctggtgggagacagcctcactctggccgacatcgctgtggcaaccgca
gcactcctgcccttcaaatacgccttggagccgtccaacaggaaagccctgacgaatgtg
accaggtggtttcttacctgtgtcaaccagcctcagtttgtaaaggtcctgggacagatc
tctctgtgtgagaagatggtgcccgtcacacccaaacccagcgttgctgttgttcctgct
gctaacgctaatccaaatgctgatgccaacgctgccaatggaaaaccaaagacagaagct
cagctgaagaaggaggcgaaaaacagagagaagctggagaagttccaaaagaagaaggag
atggaggagaagaaaaagcaagagaagaaagtggcacccccgacagagaaaaaggccaaa
ccagagaagaaggacctgggagtgatctcatacgacatccccacccctcctggagagaaa
aaagacgtcctaagccccctgccagactcgtacagtcctcagtacgtggaggcagcctgg
tactcgtggtgggagaagcagggatacttcaaacctgagtacgggcggaagagtatcagt
gagccgaacccccgtggagtgttcatgatgtgtatccctccgcccaatgtgacgggatct
cttcacttaggccatgccctaaccaacgccatccaggactgtctgaccagatggcaccgt
atgcgtggcgagacgaccctgtggaacccaggctgtgaccacgcgggcatcgccacccag
gtggtggtggagaaaaaactgatgagggagaggggcatgagccgtcacgacctggggaga
gaccagttcatccaggaggtctggaagtggaagaacgagaagggagaccgtatttaccac
cagctgaagaagctgggttcctctctggactgggacagagcctgcttcaccatggaccct
aaactgtcctatgctgtccaggaggcgttcattcgtctgcatgaggacggcgtgatctac
aggagcaagaggctggtcaactggtcctgcaccctcaactctgccatctcagatatagag
gtggataagaaggagctgactggcaggactctgctgcccgtgcctggctacaaggacaag
gtggagtttggagtactggtctccttctcctacaagatagagggatcagatgaggaggtg
attgtggcgaccactcgtatagagaccatgctgggagattctgctgtggccgtccaccct
gccgaccccagataccagcaccttaaagggaagatggtgcttcatcccttctgtgacagg
aagatgcccatcgtgtttgatgagttcgtggatgtcaactttggaacgggtgctgtgaag
atcaccccagcccatgaccataatgattatgaggttggaaacagacacaacctggccttc
atcaacatcctggatgagaatggcctgctcatcaacgtgccggctccattcctgggtatg
aaacgtttcgaagcgaggaaggctgtgctgcaggctctgaaggacagaggccagttcaag
gagaccaaagacaaccccatggtggtgcctgtctgcagtcgttctaaggacatagtggaa
cccctgctgaagcctcagtggtatgtggactgtgctgacatgggcaagcaggcagctgac
tcggtccgggagggaagactgaaaatcatcccagaccaccaccataagacctggttcaac
tggttggacaacatcagggactggtgtatctctcgtcagctgtggtggggtcacaggatc
ccagcctactttgtcaccgtgactgacccttcagtcaaaccaggagaggacatggatggt
cattactgggtgagtgggaggacagaggaggaggccagagataaagctgccaagcgcttc
aacgtttccactgacaagatcaccctcagacaggatgaggatgtcctggatacatggttc
tcttctggtattttccccttctccatcttcggctggcccaatgagacccaggacctgagt
gtgttctatccaggcagcctgctggagacgggtcatgacatcctgttcttctgggtggcc
cgcatggtgatgatgggcctcaaactcactggcaagctgcccttcaaagaggtgtacctc
catgcggtggtgagggacgcccacgggaggaagatgagcaaatctctggggaacgtcatc
gaccctctggacgtcatcacaggcatctctctagagggtctgtacgcccagctgcaggac
agtaatctggacccagtagaggtagagaaggccaagcagggacagaagtcggactacccc
actggtatcccagagtgtggcacagatgccctccgcttcgccctgtgtgcctacaccagc
caaggcagggacattaacatggatgtgaatcgtatccttggttaccgtcacttctgtaac
aagctgtggaatgctgtgaagtttgccatgaggacactgggagacaactttgttccttca
gagaaagcccagctgtgtggggaggagagcgtgtcagaccggtggattctgtcccgtctg
tgttctgctgtgggtcagtgtaacgcagggttccaggcctatgacttcccagctatcacc
acagccatctacaacttctggctctacgagctctgtgacgtctatctggagagtgtgaag
ccagtgttctccagggcggaggaagacagtgggtctcagagccaggctgtagtctgcaga
cagactctgttcacctgcctggagaccggcctgcgcctcctagctcccatcatgcccttc
gtgggcgaggagctctaccagaggttgccacggcgacaatcccaggatggccaccctagt
atccatgtcacgccctaccctgagactgaggagttctgctggcacagtgaggatgtggac
cgtcagatggagtttgtgatgaccgtggtccggaccatccgttcactcagggccgactac
aacctgaccaagacacgtgccgattgctacctccagtgtatagacagtgggacgatatct
ctggtggagcagtacagtctgcagatccagaccctgtctctgtcccagaccatccagccc
gtcccagccaccggggccgtcccagagggctgtgctgtggccattgcctccgacaggtgc
accgtccacctcatgctcaaaggcctgatagacttggagaaggaggtggctaagctgact
gtgaagaagggagagctggagaaacagatggataaactgagagaaaagatggataagagt
gactacaaggagaaggtgcctgttaaagtacaggagctggacgctgacaagctgcgtcag
agccggacggagctagagaaagcaacggaagccatagacaacttcaagagaatggtgtaa
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