Salmo salar (Atlantic salmon): 106605431
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Entry
106605431 CDS
T04363
Name
(RefSeq) thrombospondin-3a-like
KO
K04659
thrombospondin 2/3/4/5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04145
Phagosome
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106605431
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106605431
09144 Cellular community - eukaryotes
04510 Focal adhesion
106605431
09142 Cell motility
04820 Cytoskeleton in muscle cells
106605431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106605431
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106605431
00536 Glycosaminoglycan binding proteins [BR:
sasa00536
]
106605431
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Phagocytosis
Opsonins
106605431
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106605431
Exosomal proteins of colorectal cancer cells
106605431
Exosomal proteins of bladder cancer cells
106605431
Glycosaminoglycan binding proteins [BR:
sasa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106605431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_MSP1_1
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
106605431
NCBI-ProteinID:
XP_014056560
UniProt:
A0A1S3RWC2
LinkDB
All DBs
Position
ssa05:59659203..59677828
Genome browser
AA seq
955 aa
AA seq
DB search
MGARRDVPIFLALSTFLFVATCEPMDKQDMQVIDMLTLDSKTSVSAVEKVTGAMSVLSDI
YIVSTFRLPPKMGGVLLGLYSKEGNKKYLELAIMGKINKALVRYVREDGKIHTVNLQSAN
LADGRTHSIILRVGGLRRDNLHLELYVNCRLADSSQGLPPLVPLSAEKVEIRNGFKAYAR
LQGAVESLKMALGGSVAKAGALTDCPFQGDSSVYNTVGATAEVNSILGDHTKALIGQLII
FNQILGELREDIREQVKEMSLIRNTILECQVCGFHDPRSPCSPNPCFKGVSCMETFDYPG
YRCGPCPEGMMGNGTHCQDIDECSIAQPCYSPDACINTVKGFSCELCPPGLWGPPLFGVG
LEYAKHHKQECVDIDECIEVANACVPHSMCTNTIGSFRCGGCKVGYLGNQTVGCMPRRSC
ATLSFNPCDANAHCIIERNGEVSCACNIGWAGNGNTCGTDTDIDGYPDRSLPCMDNDKHC
KQDNCVYTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLEPNKDQQNSDTDSFGDA
CDNCPNVPNIDQKDTDSNGQGDACDNDIDGDGIPNVLDNCPKVPNPMQTDRDGDGVGDAC
DSCPEISNPMQTDIDNDLVGDVCDTDQDTDGDGHQDSRDNCPDHPNSSQLDSDNDGLGDD
CDDDDDNDGIPDIQDNCRLITNPNQKDSNSNGVGDVCENDFDNDSVWDLIDVCPESSEVT
LTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFH
INTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQSTPFRAMAQPGLQLKAVKSRTGPG
EYLRNALWHTGDTNEEVKLLWSDPRNVGWRDKTSYRWQLSHRPQVGYIRVKLYEGTEIVA
DSGVVIDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTVPDDFNPYRKQVLLHIKV
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgaggcgcgatgtgccaatttttctggctctatccacatttctattcgttgca
acatgtgagccaatggataagcaagatatgcaagtcattgacatgctaaccctggactcc
aagaccagtgtgtctgcggtggagaaggtgacaggtgccatgagtgtgctcagtgacatc
tacatcgtgtccacattccgcctgcctcccaagatgggaggggtgctgctgggcctctac
agcaaagaggggaacaagaagtacctggagctggccatcatgggaaagatcaataaagct
ctggtgcgttacgtgagggaggatggcaaaattcacacagtgaacctccagagcgcaaac
ctggctgatggtcgcacacactccattattctccgggtcggaggcctgcgcagagacaac
ctacacctggagctctacgtcaattgtcgattggctgactccagccagggcctcccacca
ttggtccctctctctgcggagaaggtggagattcgtaatggcttcaaggcctacgcaagg
ctacagggcgctgtggagtccctcaaaatggcgctagggggcagtgtggccaaagcaggt
gccctgacagactgtccattccagggggattcatcagtctacaacacagtcggtgcgact
gcagaagtgaactccattctaggtgaccacactaaggctctgattggtcagctaatcatc
tttaaccagatcctaggagagctgcgagaggacatcagagagcaggtgaaggagatgtcc
ctgattaggaacaccattctggagtgccaagtgtgtggcttccacgaccctcgttccccc
tgctcccccaacccctgttttaagggtgtgtcctgcatggagacctttgactacccaggg
taccgctgtggtccctgcccggagggcatgatggggaacggaacccactgccaggacatt
gacgagtgttccatagcccagccctgctactctccagatgcgtgtataaacacagtgaag
ggtttcagctgtgagctctgcccccctggtctctggggcccacccctctttggggtcgga
ctggagtacgccaagcaccacaagcaggagtgtgtagacatcgatgagtgtattgaagtt
gccaacgcctgtgtgccacactccatgtgtaccaacaccatcggctcgttcaggtgtggt
ggctgtaaggtgggttacctggggaaccagacagtgggctgcatgccccgtaggtcctgt
gccacactcagctttaacccctgtgatgccaacgcccactgcattatagagaggaacggc
gaggtgtcctgtgcgtgcaacattggctgggccggtaacgggaacacttgtggcacagat
acagacattgatggatacccagaccgctctctaccctgtatggacaatgacaagcactgt
aaacaggacaactgtgtttacacacccaactcaggccaggaggacgcagacaacgacggc
atcggagaccagtgtgacgaggacgcagatggggacggcatcaagaatgtggaggataac
tgtcgactagaacccaacaaagatcagcagaactcagacacagactctttcggtgacgcc
tgtgacaactgtcccaatgtccctaacattgaccagaaggatacggacagcaatgggcaa
ggagacgcctgtgacaatgacatagatggagatggtatccccaacgtgctggacaactgc
cccaaagtccccaaccccatgcagacagacagggacggagacggggtaggagacgcctgc
gacagctgccctgagatcagcaaccccatgcagacggacattgacaatgacctggtggga
gatgtgtgtgacactgaccaggacacggatggggacggtcaccaggactccagggacaac
tgccctgaccatcccaacagctcccagctggactcggacaacgatggccttggggacgac
tgtgacgatgacgatgacaatgacgggatcccagacattcaagacaactgcagacttatc
accaaccccaaccagaaagattctaacagtaacggggtgggcgacgtgtgtgagaacgac
tttgacaatgattcagtctgggatctgattgatgtgtgccctgagagttcagaggtcaca
ctgacagactttagagcctatcagacagtcattctggatccggagggcgatgcacagatc
gatcccaattgggtggtgctcaatcagggcatggaaatagttcagaccatgaacagtgat
cctggtttagctgtgggctacacagcgttcaatggggtggactttgagggcaccttccac
atcaacacggtgacggacgacgactatgcaggcttcatcttcggctaccaggactcctcc
tccttctacgtggtgatgtggaaacagacagagcagacctactggcagtcgacacccttc
agggccatggcccaacctggcctgcagctcaaagcagtgaagtcccgtacagggcctggt
gagtacctgcgtaacgccctgtggcacacaggtgacaccaacgaggaggtgaagctgctg
tggtcggacccacggaatgtgggctggagagacaagacgtcttaccgctggcagctcagc
cacaggccccaggtgggctacatcagggtgaagttatatgaggggacggagattgtggct
gactctggcgtggtgattgacactaccatgagaggcggacgactgggggtcttctgtttc
tcccaagagaacataatctggtccaacctgcgctaccgctgcaacgacactgttccagac
gacttcaacccatatcgcaaacaggtcctgctgcacatcaaggtgtga
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