Salmo salar (Atlantic salmon): 106605454
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Entry
106605454 CDS
T04363
Name
(RefSeq) DENN domain-containing protein 4B-like
KO
K20163
DENN domain-containing protein 4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106605454
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
106605454
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
106605454
NCBI-ProteinID:
XP_014056609
UniProt:
A0A1S3RWH4
LinkDB
All DBs
Position
ssa05:59135537..59182479
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AA seq
1500 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLAPGGSAPLDDEGQQRGGRVVEPVTDLVVIARGLGEEVPEGFT
CIEKTQGGHPAELSAGLINNPHMYLCYRRGHDKPPILDLGVLYEGKEVVKQGWYVIETTP
YSRSASLSSGGPATHRTFLTYRRAPESQALHTLGVTDISLLLPSKGEVAAHTFCRVEKNL
NTGIWGPALYLCYKRAVAKANALVYEAGLISRYPEADVESFPLPESVPMFCLPMGVTVES
WPLNTKYQLPVFSTFVLTSACGDKVYGAAIQFYEAFPRECLSERQSVRLGLVSVVDRRPI
TNRTLQVKKSVCVLSHWPFFTVFQKFLTFVYRYSISGPHVLPLEKHISSFMHNVPFPSPQ
RPRILVQLSPYDNLLLCQPVSSPLLLSGASFVKLLQNLGPENACVLLLAVLTEHKLLLHS
LRPDVLTSVSEALVSMTFPLRWHCPYIPLCPLRLADVLCAPMPFIVGVHSSYFDLYDPPT
DVVCVDLDTNTIFQAEDKKPLSWRSLPRKHGKMLVNTLTNLMKTLEKIYTTGQEEATLEF
LLTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRAYLLPITQAPSDRTTDCSSLFNLQG
FLKSRERTHQKFYTQLTRTQMFTQFIEECSFVSDRHACLEFFDECVQKSDVEKPEEVRLI
DLDEAHSGEHTVFIMPPEEPQEPDGSECPTHYSYETFPVLCMDLFDQPQDQLRVPTKGSA
PSSPAPRRTKQEIKLAQKRAQIYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAESAKVRAL
QTAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYAY
YNKAVLESKWPSTNQGGRLRWAKLRNVLMAVAQFRQPVRQRQKSGSVGSRTDTMDSNQRS
RPQSNLIRQSSWSGLSESSSHESLTGSMVKSNSLNSMRGSTDKSKLSMKAVLRNEGANGC
SDPASRKPPVGPRDTSTPSPFPPGGVLVRRDQVCLSNFYKDCAETADSDPDCSCQPGERD
GRPPGPRDTVSRKAVDENYNNVSPPSRGSLTGKLQQLLTPTRHRVSGRRAASVDARRSGG
ENGPVRRVSEQRQSRKAQVAESLLKAKERLYNATSESSLSVGSDVDLPDTTNLAFPLRKS
WDTNQEGAGLQVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSTTFVPLLNA
EICDLGPISSAHHSLERTNWNTEEEVESAAKPPGGQEAILGHNGVSEDSSSETSSYSESS
SATMGSSVGESPQVTVAYLSPLVLRKELESLLENEGEAVLAQGQLLDSHSIIFWNLVWYF
HRLGLPSNLLQLVRSSPLANQLAQTSENSAVRVRLLWDTLTPDTDHWPPLYILWRIHSGV
PMRNHSWRRHNHPFTLAFLEEVLRWVGMNEVHKGITLFLETIAKQPGTPKIQRSLYREML
FLTLAAMGRDHVAAFDKKYKAAYQRLSGSLGRGELRRKRAQPPSPKAVDCRRSFLLPLEC
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagaaatgcccccagctagtggactactttgtggtggcagggctggctccg
gggggctcggccccactggacgacgagggccagcagagagggggccgggtggtggagccc
gtcacagacctggtggtgatcgcccggggcttgggggaggaggtgcccgagggcttcacc
tgcatcgagaagacccaggggggccacccggccgagctgagcgccggactcatcaacaac
ccccacatgtacctgtgttaccgccgtgggcatgacaagccacccatcctcgacctcggg
gtgctgtacgagggcaaagaggtggtgaagcagggctggtacgtgatcgagaccaccccc
tacagccgctcagccagcttgagctccggggggcccgccacccaccgcaccttcctaact
taccgccgggccccagagtcccaggccctccacaccctgggggtcacagacatctccctc
cttctgcccagcaagggggaggtggccgcccacaccttctgccgggtggagaagaacctc
aacactggcatatggggtccagccttatacctgtgctacaagagagctgtagccaaagcc
aatgccctagtctatgaagcaggtctgatcagtcggtatccggaagcggacgtggagtcg
ttccccctgccagagtctgtgcctatgttctgtctgcccatgggtgtgacggtggagagc
tggcccctcaacaccaagtaccagctccctgtcttctctaccttcgtcctcactagcgcc
tgtggcgacaaggtttacggtgctgccatccagttctatgaggcgttcccacgggagtgc
ctctcggagcggcagagtgtccgtctgggcctggtgagcgtggtggaccggcggcctatc
accaaccgcaccctgcaagtgaagaagagtgtgtgtgttctctcccactggcccttcttc
accgtcttccagaagttcctcaccttcgtctaccgatactccatctccggaccccacgtg
ctgcccctcgagaagcacatctccagcttcatgcacaacgtcccgttcccttcccctcag
cggcctcgcatcctagtgcagctctccccctatgacaaccttctcctctgtcagcctgtc
tcctctcccttactgctcagtggtgccagctttgtgaagctgctgcagaacctgggccct
gagaacgcctgtgtcctgctgctggccgtgctgacggagcacaaactactgctccactct
ctccgccccgacgtcctcacctccgtcagcgaggccctggtgtctatgacgttccctctg
cgttggcactgcccgtacatccccctgtgcccgctgcggctggcagacgtactgtgtgcc
cccatgcccttcatcgtgggcgtccactccagctactttgacctctatgacccccctact
gacgtggtgtgtgttgacctggacaccaacaccatctttcaagcagaggacaagaagccg
ttgtcatggcgatcgctaccaaggaagcatggcaagatgctggtgaataccctcaccaac
ttgatgaagactctggagaaaatctacaccactggccaagaggaggccaccctggagttc
ctgctgacggactatgacttgatctacgggcgtcagaagcagctggagctggagatccag
gaggccttcctgcgcttcatgagctgcttgctgaggggctaccgtgcctacctgctgccc
atcacccaggccccctcagacaggaccaccgactgcagctccctcttcaacctgcagggc
ttcctgaagtctcgtgaacgcacccaccagaagttctacacccagctgaccaggacccag
atgttcactcagttcatcgaggagtgctcattcgtcagtgaccgccacgcctgtctggag
ttcttcgacgagtgtgtccagaagtcggatgtggagaagcctgaggaggtgcgtctaata
gacctggatgaggcccacagtggggagcacacagtcttcatcatgcccccagaggaaccc
caggaaccagacggttcagagtgccccactcactatagctatgagacgttccctgtgctc
tgcatggatctgtttgaccagcctcaggaccagctccgtgtccctaccaaggggagtgcc
cccagcagccctgctccacggcggactaaacaggagattaagctggcacagaagcgggca
cagatatactcggcagtgcccgacatgtggtccaaatgcctgctgggccactgctatggg
ctgtggttcatctacctgcccacctttgtgcgggcggagagtgccaaggtgcgtgccttg
caaacggcatacgaggtgctcaagcacatggagaccaggaaggtggtactaccggatgag
gtgtgttacaggatcctgatgcagctgtgtgggcagtacgggcagcctgtgctcgctgtt
agggtacttctggagatgaagaaagctgggatcacacccaacaccatcacctatgcatac
tacaacaaggcagtgctggagagcaagtggccctccaccaatcagggtggccgtctgcgc
tgggccaagttgcgtaacgttctgatggccgtggcgcagttcagacagccagtcagacag
cggcagaagagtggttcagtaggctcgcggacagatacaatggacagtaaccaacggtcc
cgcccacaatctaacctgattcgtcagtccagctggagcggcctgagtgaaagctccagc
cacgaatcgctgacggggtctatggtgaagagcaacagcctgaacagcatgagaggctca
acagacaagtctaagctctcaatgaaggcggtgctccggaacgaaggtgccaatggctgc
agcgatcccgcctcccgtaaaccccccgtggggccacgagacacatccaccccttctccc
tttccccctggtggtgtcctggtgcgccgcgaccaggtgtgcctgtccaacttctacaaa
gactgtgccgagacggccgactctgacccagactgcagctgccagcctggggagagagac
ggcaggccacctgggcctagagacactgtgagccgcaaggccgtggacgagaactacaac
aatgtgtcaccgccgagtcggggcagtctgacggggaaactgcagcagctgctcacgcct
actcgccatcgagtctcggggcggcgggccgccagtgtagacgcccgacgctcgggggga
gaaaacgggccggtgcgcagggtgtcggaacagagacagtcccgaaaagcgcaggtggct
gagagcctactgaaggctaaggagaggctctacaatgctacctctgagagttctctgtcg
gtggggagtgacgtcgacctccctgacaccaccaatttggcctttcctctccgcaagtcc
tgggacaccaaccaagagggagcgggactacaggtgttgatgtcgagctgctccttgtgt
cggagctgtaactccctggtctatgacgaggagataatggccgggtggacgtctgatgac
tccaacctcaactccagctgtcccttctgctcgaccaccttcgtcccccttctcaacgct
gagatctgtgacctaggacccatcagcagcgctcaccacagcctggaacgtaccaactgg
aacacggaggaggaggttgagagcgcagccaagccccctggtggccaggaggccatcctg
ggtcacaacggtgtgagtgaggactccagctctgagaccagcagttattctgagagcagc
agcgctaccatgggttcatcagtgggcgagtctccccaggtgacggtggcctacctgagc
ccattggtgctgcgcaaggagcttgagagcctgctggagaacgagggcgaggcggtgctg
gcacagggccagctcctggacagccactccatcatcttctggaacctggtgtggtacttc
catcgcctgggcctgcccagcaacctgctgcagctggttcgctcctcaccgctggccaac
caactagcacagacttcagagaactcagcagtgagggtgaggctgctgtgggacacactg
acccctgacacagaccactggccccccctctacatcctgtggaggatacacagtggcgta
cccatgcggaaccacagctggcggaggcacaaccaccccttcaccctggccttcctggag
gaagtgctgcgctgggttggcatgaacgaggtacacaagggaatcaccctcttcctggaa
accattgccaagcaaccaggcacgcccaagatacaaaggagtctgtacagagagatgctc
ttcctcacgctggctgccatgggtagagatcacgttgctgcgtttgataagaaatacaag
gctgcgtaccaacggctgagtggctccttgggtcgcggggagctccgcaggaagcgagcc
cagccacctagccccaaggctgtggactgcagacggagcttcctgctgcccctcgagtgc
tga
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integrated database retrieval system
