Salmo salar (Atlantic salmon): 106605493
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Entry
106605493 CDS
T04363
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106605493
Enzymes [BR:
sasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106605493
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
106605493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
106605493
NCBI-ProteinID:
XP_014056692
UniProt:
A0A1S3RXS0
LinkDB
All DBs
Position
ssa05:62108386..62159305
Genome browser
AA seq
1446 aa
AA seq
DB search
SPSLPQIQRSRNKQMKEMFPDGFGIHHAGMLRADRSLMESMFSRGYLKVLCCTATLAWGV
NLPAHAVIIKGTQIYDAKRGTLVDLGILDVMQIFGRAGRPQFDKYGEGTIITAHDKLSHY
LTLLTQQNPIESQFLDTMADNLNAEVSLGTVTNVEEAVRWLSYTYLYIRMRANPLAYGIN
HKAYQMDPGLEMYRKELVVMAARKLDKARMIRFEERTGYFASTDLGRTASHFYIKYNTME
TFNELFNSQKTEADILSIVSKAEEFEQVKVRDEEMEELEQMLCNYCELPAAGGVENGYGK
INILLQTYIGRGEVDSFSLISDLSYVAQNAARIVRALFEIALRKRWPTMTYRLLNLCKVI
DKRLWGFAHPLRQFSILPHNVLARLEEKKLTVDKLKDMQKDEIGHMLHHVNIGLKVKQCV
HQIPSILMEATIQPITRTVLRVRLQITPDFQWHDQCHGSVGEPWWLWVEDPINDHIYHSE
YLLLQKKQVVSGEPQQVVFTIPIFEPMPSQYYIKAVSDRWLGSEAVCIINFQHLILPERH
PPHTELLDLQPLPITALGNPEYESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKT
IAAELAMFRVFNQYPTSKVVYIAPLKALVRERIEDWKIRIEEKLGKKVVELTGDVTPDMR
AIAAADLIVTTPEKWDGVSRSWQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFI
SSHTNKTVRVVGLSTALANARDLADWLGIGQVGLFNFRPSVRPVPLEVHIQGFPGQHYCP
RMASMNKPVFQAIRSHSPAKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDETQM
TDIIATVRESNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKIQILIATSTLAWGVNFP
AHLVIVKGTEYYDGKTRRYVDYPITDVLQMMGRAGRPQYDDQGKAVILVHDIKKDFYKKF
LYEPFPVESSLLGVLSDHLNAEIAAGTITSKQDAMDYITWTYFFRRLVMNPSYYSLDDIS
HETINKYLSNLVERSLRDLECSYCMEIGEDDCTIEALTYGRISSYYYLKHQTVRMFKERL
RAELPIQDILSVLTDAEEYGELPVRHNEDQLNSELAQRLPLQVNPHSYDSAHTKTHLLLQ
AHFSRAQLPCSDYGTDTKTVLDNAIRICQAMLDVAANEGWLVTALSICNLVQMIVQGRWL
NDSSILTLPTIEQQHLYLFSRWSSKGGKGGARGFHGPIEGLPELIATCEGRENTFAAIVG
EELQPHQISQAWSFLSNLPVVEVRLSVKGWWEGCGEQTERPLPAAGGKLRDDRSWLDVHA
DQEYVLQVSLRRINTGQQRRKQDSKAQAPRFPKNKDEGWFLVLGEVERRELLAVKRIGYC
RHRSTVSLAFYTPEKTGKCIYTLYLMSDSYLGLDQQYDLHLNVTPACIAAQVNSEVTEAM
GGMSVK
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
tctccttctctcccccagatccagcgttccaggaacaagcagatgaaggagatgttccca
gatggttttgggatccaccacgctgggatgctgcgtgctgaccgtagtctgatggagagc
atgttctccaggggttacctcaaggttctgtgctgtactgccacactggcctggggagtc
aacctgcctgcacacgctgtcatcatcaagggcacccaaatctacgatgctaagcgtggt
accctggtggacctgggcatcctggacgtgatgcagatcttcgggcgtgccgggcggccc
cagtttgacaagtacggcgagggcaccatcatcacggcacatgacaagctgagccactac
ctcaccctgctcacgcagcagaaccccatagagagccagttcctagataccatggctgat
aacctcaacgctgaggtatcactagggactgtgactaacgtggaggaagcagtgaggtgg
ctgagttacacctacctgtacatccgcatgagagccaaccctctggcctacgggatcaac
cacaaggcctaccagatggacccaggtctggagatgtatcgtaaggaactggtggtgatg
gcagccaggaagctggacaaggccaggatgatccgcttcgaggagaggacaggatacttc
gcctccactgacctgggcagaaccgccagtcacttctacatcaaatacaacaccatggag
acgttcaacgagctgttcaactcccagaagacagaggctgacatcctcagcatcgtctcc
aaggccgaggagtttgaacaggtcaaggtgcgtgatgaggagatggaggaactagagcag
atgctgtgtaactactgtgagctgcctgctgcaggcggagtggagaacggatacggcaag
atcaacatcctactgcagacctacatcggccggggagaggtggacagcttctccctcatc
tcagacctgtcctacgtagcacagaacgcagctcgtatcgtcagggctctgtttgagatt
gctctgaggaagcgctggcctaccatgacctaccgcctgctcaacctgtgtaaagtgata
gacaagcgtctgtggggcttcgctcaccccctgagacagttctccatcctgcctcacaac
gtgctggcccgtctggaggagaagaaactcactgtggacaaactgaaagatatgcagaag
gacgagataggtcacatgctccaccacgtgaacatcgggttgaaggtgaagcagtgtgtc
caccagatcccttccatactgatggaggccaccatccaaccaatcacacgcactgtgctc
agggtccgcctccagatcacccccgacttccagtggcatgaccagtgtcatggttcagtg
ggagagccctggtggctgtgggtggaggaccccatcaacgatcacatctaccattcagaa
tacctgctcctacagaagaaacaggtggtgagtggggagccccaacaggtggtgttcacc
atccctatctttgagcccatgccctcccagtactacatcaaagctgtgtcagaccgctgg
ctgggctcagaggctgtctgcatcatcaacttccaacacctcatcctgcctgagagacat
cccccacatactgagctgctggacctgcagccgttgcccatcaccgccctggggaacccg
gagtacgagagtctgtacaagttcacccacttcaaccccatccagacacagatcttccac
acgctctaccacaccgacaccaacgtcctgctgggggcgccaacgggctccggtaaaacc
atcgctgccgagttggccatgttccgagtcttcaaccagtaccctacctccaaggtggtg
tacattgcccctctgaaagctctggtcagggagaggatcgaggactggaagatcaggata
gaggaaaaactggggaagaaggtcgtggagctgacaggtgatgtgactccagacatgcgg
gccatcgccgcagctgacctgattgtgaccacgccggagaagtgggatggcgtgagtcgc
tcctggcagaaccgcagctacgtccagaaagtagccatcctcatcatcgacgagatccac
ctgctaggggaggacagaggtcctgtgctggaggtcatagtgtccaggaccaacttcatc
tcctcccacaccaacaagactgtccgcgtggtgggcctgtctacggccctggccaacgca
cgagacctcgccgactggctagggattggacaggtgggtttgtttaacttccggccctct
gtgcgtcccgtcccattggaggttcacatccagggcttcccaggacagcactactgcccc
cgcatggccagcatgaacaagcctgtgttccaagcgattcgcagtcactctccagccaag
cctgttctgatctttgtgtcgtcgcgacgacagactcgtctgacagctctagacctgata
gccttcctggccaccgaggacgaccccaaacagtggctgcaccaggacgagactcagatg
acagatatcatcgccacggtgagggagtccaacctgaagctgacgttggcgtttggtatc
ggcatgcaccacgctggactacacgagagagacaggaagactgtggaggaactgtttgtc
aactgcaagatccagatactgatagccaccagtactctggcctggggagtcaacttccct
gcccatctggtcattgtgaaaggtactgagtactacgatgggaagaccagacgctacgtg
gactaccccatcacagacgtgctgcagatgatgggccgtgcaggccgccctcagtatgac
gaccagggcaaagctgtgatcctggtccacgacatcaagaaagacttttacaagaagttc
ctctacgaacccttccctgttgagtccagtctcctgggtgtgctgtcagaccatctgaat
gctgagatcgctgcagggaccatcacctctaaacaggatgctatggactatatcacctgg
acgtacttcttccgccggctggtcatgaaccccagttactacagcctggatgacatcagc
cacgagaccatcaacaagtacctgtccaacctggtggagaggagtctccgagacctggag
tgttcctactgtatggagataggagaggatgattgcaccattgaggccctgacgtacggt
cgtatctcctcctactactacctgaagcaccagacagtcaggatgttcaaggagaggctg
agggctgagctgcccatccaggacatcctctctgtcctcacggatgctgaggagtacggg
gagctgcccgtcaggcacaacgaggaccagttgaacagtgagctggctcagcgtctcccc
ctgcaggtcaacccccacagctacgacagcgcccacaccaagacccacctgctgctgcag
gcccatttcagccgcgcccagctgccctgctccgactacggcaccgacaccaagaccgtg
ctggacaacgccatacgcatctgtcaggccatgctggacgtagcagccaacgagggctgg
ctggtgactgctctcagcatctgtaacctggtgcagatgatcgttcagggcaggtggctc
aatgactcctctatactgaccctacctaccatagagcagcaacacctctacctgttcagc
aggtggagctccaagggagggaagggcggagccaggggcttccacggaccaatagaaggg
ctccctgaactgattgccacctgcgaggggcgggagaacacctttgctgccattgtgggg
gaggagcttcagccccatcagatctcccaggcctggtcgttcctcagcaatctgccggtg
gtggaggtgcgtctgagtgtgaagggttggtgggaggggtgtggggagcagacagagcgc
cccctccctgcggccggggggaagctcagggacgacagaagctggctggacgtccacgct
gaccaggagtatgtcctgcaagtctcactgcggcgcatcaacaccggccagcagaggagg
aagcaggacagtaaggcccaggcccccaggttccccaagaataaggatgagggctggttt
ctggttctaggagaggtggagcgcagagagctactggccgtcaaacgcatcggatactgc
cgacaccgcagcaccgtttccctggccttctacacccccgagaagaccggaaagtgtatc
tacacgctatacttgatgagtgacagttacctgggtctggaccagcagtatgacctccac
ctcaacgtgacccctgcctgcatcgctgcccaggtcaacagtgaagtcactgaggccatg
ggaggcatgtccgtcaagtga
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integrated database retrieval system
