Salmo salar (Atlantic salmon): 106605556
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Entry
106605556 CDS
T04363
Symbol
TLR
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sasa04054
]
106605556 (TLR)
Pattern recognition receptors [BR:
sasa04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
106605556 (TLR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
TIR
LRR_4
TIR_2
LRR_9
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
106605556
NCBI-ProteinID:
XP_014056817
UniProt:
W8W3N9
LinkDB
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Position
ssa05:64536179..64543175
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AA seq
975 aa
AA seq
DB search
MAGLKYKILASVAIVLHIAQFTVGYSFRNCTEDPTSNHTKFICIRHQAKNISAIVGDLPP
YATTIIISINLIKHIPDNTFDHLPNLRTLQIDNNHLETIDNQAFQNMSQLKSLNLSLNKI
SNLSSSVFQDLKNLVNLSLNNNSLIMLPPGIFSSLSNLDVLILRQNYLNNFSAVAESVTH
LTKLTKLDLCNNYLTSLHHSNHTDLPESLTTLYLCKNKLVTLACEWGFLSHVLLLDLSYN
DQLPSRAFQGVDLRKLNYMRLRSTNVTVPELLNVSNVRAGNIDFSGMGLKTDNLLMELCS
LLSTKVKFVKKLSLGSNGILLLRKNTLSNCPPIRGLLDLSFNQLRKASCLHFLKGQDQIK
NFTAEKNHLTSLMSCNKQNLTFPNLTDLSYRYNRILNVNSFAFHHTPNVRTLQLNINIIA
YLDHKAFSGLTSLVTLRLDNNLLTDLYKDSFEDLHSLEILNLRNNQIAVIFNKTFHSLKC
LHILDLGGNKITHFEDSAFVGLVNLANFYLDGNNLKQIDSAKFKPFHATLEVLDLHGNQV
SFSSKRTNSPFVNLTKLRNLKLDAQMPHGLNMLPYAFFRGLNSLQSLYLTDNHIFSFAAD
TFDDLTNLTFLSLDNSCAGVMQLQPGVFKNLRKLSKLSARNMGIQSFSNEVFGNLTELQI
LLLNQNVMQSLDVNVLEALPKLRYLDLRNIPLSCTCLNSDLQNWTLTNQRVQLVLQYSLQ
CQDKKLQKSFYNFDTNVCYLDLGEYLFATTTTVILLLTIIPLLYNKLYWKLKYSYYVFRS
WFGQHWRRLREKEEHCQYDAFISYNSADEPWVLDQLLPNLEGNGASFRLCLHHRDFELGR
NIVDNIVSAVYSSRKTICVVSRHFLCSEWCSLEIQLASYRLFHELRDVLLLIFLEPIPER
QLSAYHRMRKVMLKKTYLQWPGSDCTDPVKAQELFWNHLRRALRSGSSRFEEEDEGREEY
FNQPPTDDDNYYLMP
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggccgggctaaaatataaaatattggcatcagtggcaattgtccttcacattgcccag
ttcacagttggctatagcttcagaaattgcactgaggatccaacctcaaaccacacaaaa
ttcatttgcatccgtcaccaggcaaagaacatttctgccattgtaggtgacctgccacct
tatgccaccacaattataatctccataaacctgataaaacacatacctgacaataccttt
gatcacttacctaacctcaggacgcttcagattgacaataaccatctggagaccatagat
aaccaggcattccaaaatatgagccaactgaagagcctaaacctgtccttgaacaaaata
tcaaatctcagctcctctgtatttcaagacctcaaaaaccttgtcaacctgtcactaaat
aataactcactgattatgctccctccgggtattttctcttcactctccaatctggatgtc
ctcatattacggcagaactacctgaacaacttctctgcggtggcagaatctgtgactcac
ttaacgaagctgacaaaactagacctgtgcaataactatctaacatccctccatcattct
aaccatacagacctaccggagtccctcaccaccctctatctctgtaaaaacaaactggtc
actttagcgtgtgagtggggcttcctcagccatgtactactgctggatctctcctacaat
gaccagctcccttcaagggctttccaaggtgtggacttgcggaagctaaactacatgcgt
ttgcgttcaaccaatgttacagtgccagagcttttgaatgtcagcaatgtcagagctggg
aacatagacttctctggtatggggttgaagactgacaatctgctcatggagttatgtagc
cttttgagtacaaaggtcaaatttgttaaaaagctgagtctgggaagcaatgggattctg
ttattgcgaaagaacacactttcaaactgtccaccaatccggggtttattggacctttcc
ttcaaccaattgaggaaggcaagttgcctccactttctcaaaggacaggatcaaatcaag
aacttcacagcagagaaaaaccacctcacctccctaatgtcctgcaacaaacagaatctc
actttcccaaatctgactgatctgagctaccgttacaatcgcatactcaatgtcaactct
tttgctttccaccacacaccaaatgtgaggaccctacaactcaacataaacataatcgcc
tatcttgaccataaggctttcagtgggctgactagtcttgtcacactgcgtctggacaat
aacctcctgaccgatctgtacaaggatagctttgaagatctgcatagcctggaaatactt
aacctacgtaacaatcagatagctgttattttcaacaagactttccattcactcaaatgc
ctgcacattttggatcttggagggaacaaaatcactcattttgaagactcagcctttgtg
gggctcgttaacctggccaatttttaccttgatggaaacaatctcaaacagatcgacagc
gccaagtttaaaccattccacgccacacttgaagttcttgatctacatgggaatcaggtt
agcttctcctctaaacgtaccaactctcctttcgtgaatctaacaaaacttcgcaacctc
aaactagatgcgcagatgccccacggcctcaacatgctgccttatgcctttttccgtggt
ctcaactccctccaatcgctctacctcaccgacaatcacatctttagctttgcagcagac
acttttgacgatctgaccaacttgactttcctctccttggacaactcctgtgccggggtg
atgcagctgcagccgggcgtcttcaaaaacttgcggaaattgagcaagctcagtgcaagg
aacatgggcatccagtccttctcaaacgaggttttcgggaatctgacagagctgcagatc
ttgcttctcaaccagaacgtaatgcaatccttagatgtgaatgtgctggaggctctacct
aaactgcgctacctggacctgcgcaacattcctctaagttgcacctgcctcaacagtgac
ctgcagaactggactttgacaaaccagagagtccagttagtcttacaatacagtctacag
tgccaagataaaaaactccaaaaaagcttctacaactttgacaccaatgtttgctacctg
gacctgggagagtacctttttgctaccacaaccactgtgattttactgctgactataatc
ccgcttctctacaacaagctctattggaaactgaagtatagctattatgtgttccgctcc
tggttcggccaacactggcgcaggctgagggagaaagaggagcactgccaatacgatgct
ttcatctcctataactcggcggacgagccctgggtactagaccagctacttcccaacctg
gagggcaacggagcctctttccggctgtgcctgcaccaccgtgactttgagctgggccgc
aacattgtggacaacatcgtctccgctgtgtacagcagccgcaagaccatctgcgtggtt
agtaggcatttcctgtgcagcgagtggtgctccctggagatccagctggccagctacagg
ctcttccacgagctccgggacgtgctcctgctcatcttcctggagcccatccctgaaaga
cagctgtcggcttaccaccgtatgagaaaggtcatgttgaagaagacctacctgcagtgg
ccagggtcagactgcactgacccggtcaaggcccaggaactgttttggaaccatctgagg
agggcactgaggagtgggagcagcaggtttgaagaggaagatgaggggagggaggaatac
ttcaatcagccaccgacggatgatgataactattacttaatgccttaa
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