Salmo salar (Atlantic salmon): 106605561
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Entry
106605561 CDS
T04363
Name
(RefSeq) uncharacterized LOC106605561
KO
K06105
tight junction protein 4
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106605561
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GFIT
Motif
Pfam:
Pilt
HIP1_clath_bdg
Bacillus_HBL
Prominin
DUF4200
Med9
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
106605561
NCBI-ProteinID:
XP_014056828
UniProt:
A0A1S3RX55
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Position
ssa01:complement(54095606..54153722)
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AA seq
1148 aa
AA seq
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MTSAAPARKPYRKAPPQHRETRNSLPLFREDLSGSTPPAHTAGPNLPDPCQVIRIPNHTP
GFQRSRFTDPYPKCPVSPEGRNIFSPSWSLLSDSELDVSSLSSLELTVLPPPRIFSHGGI
TVGVTANQTARDLQGMSHFLSRSEGLLALSGDEDLSSEDSQQGGHSASIAQSSRSMERSL
AFKDNAEILVPRGGQHHQQTSFQRPALPPKGILKQPNQLGAHFSDLRKSKSVEMLGQSRG
RKPERKSLDRETERKDLGKTSSIRQVSPSSTSSSSAPSERKIQFLENKLKFSNFLNDVTT
RVICPARMQMLGGKKQEAPRPAKGNQHRAQNAPQTPEVKKRGAERKSEKSRPWDEWSSAL
NRDRPSRKDKEGRPKTWRIPLRKDSPDQDAKKRRADPLRADPHREGARPKSEGPIYSHVG
GGGDSSSRRSSETDWEDKSRQGDHHQQQQYQPSQLETRTQHKDTSRPRAKYVPQPPHSER
EQVTTVSQHSSFSILSQIKDSLSDADRIKILQQQNEDLRRRLSHTTHKMEAMETEFETSR
HYMREEMGRTRDDLEKMRDKFRRLQNSYTASQRANQDLEEKLHALLRKVERDKKTMDQEI
VELTNKLLDAKNTIDKLEELNERYRQDCNLAVQLLKCNKSHFRNHKFADLPYELQDMVNK
HMKASLPDKSSQGAQGQDSDTMSLTPADVVPTSVIARILEKPEPLVLNSAQSSSSAGRPQ
AEDVFVHVDMTGHQAGGGGRENGGPGHSSRAPAQSSQAQELLQQNGMCRSQSSLSADGQS
GEEGREGGAFEKLNPYPAPPPPHPLYPGRKVIEFSSDDKVKIPKNSPLPNCTYATRQAIS
LSLVQNDEENERQRTVPNSPAVSDGGWRSGTSSSSGGGGQRDPCRTPTQLDTADPLSNQS
SPFSSPPQPPSAFASSGSSEEDLLANWQRMFVEKMAPPSDGTLVNRTSFSSETVKDLERT
RTGKPVGGGSDRGALRGAYSDGEEGSSTRSWTASRESSLDTDTSSMADLRTRRGHYGADF
STEESEQLLMALDPLDNDRDNTSGDTVSTAITVETSPAEAKRNDFVDETGSVGSSAEERD
ILPQDFPVIAPRVLAGLEDYTKNTPPLSANSSTSTPGRPLKSPKRMGVHHLHRKDSLTRA
QEHGNLLD
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgctgccccggccaggaagccgtaccgcaaggctccgcctcagcaccgcgag
acacgcaacagcctgcccttgtttcgagaggaccttagtgggagcacgccgcctgcccac
accgctggccccaacctgcctgacccatgccaggtaattcgcattccaaaccatacacca
ggttttcagcgatcaaggttcacagacccctacccaaaatgcccagttagtcctgagggc
cgcaatatattctccccctcctggtctctgctctcggacagcgaactggatgtctccagc
ctgtccagcctggagcttaccgttctgcccccaccccgcatcttcagccatggaggcatc
accgtgggtgtcactgccaaccagacagccagggatctacaggggatgagccacttcttg
agccgcagtgagggcctactcgccctatctggagacgaggacctcagttcagaggactcc
cagcaaggtggccactccgcctccatagcccagtccagtcgtagcatggagcgctcgctg
gccttcaaggacaatgcagagatcctggtgcccagaggtggtcagcaccaccagcagaca
tccttccagagaccggccctccctcctaaggggatcctaaagcagcccaaccagctgggc
gcccacttctcagacctcaggaagtccaagtctgttgagatgctgggccagagccgtggc
cggaaacccgagagaaagtctctggacagggagactgagaggaaggatctgggcaagacc
tcttcaatcagacaggtttccccatcttccacctcatccagctcagcgccctcagagaga
aagatacagtttctggaaaataagctgaaattctccaacttcctgaatgatgtcaccact
agggtcatctgccctgccagaatgcagatgctgggtggaaaaaagcaagaggccccaaga
ccagctaagggaaaccagcaccgggcacagaatgccccccagactcctgaagtgaagaag
cgaggagccgagaggaagtctgagaagagccggccgtgggacgagtggtcctcggcgttg
aacagggacaggccttccaggaaggacaaagagggccggcccaagacctggcgcatcccc
cttaggaaggacagccccgaccaggatgcaaagaagcgtagggcagaccctctcagggca
gacccccatcgagagggagcaaggcccaaatcggaggggcccatctacagtcatgtgggg
ggtggaggtgactccagctcccgacgcagcagtgagactgattgggaggacaagagtcgg
caaggggaccatcaccagcaacaacagtaccagccctctcagctggagaccaggacacag
cacaaagacacgagtagacccagagctaaatacgtgccccagcctcctcactctgagagg
gaacaagtgacaacagtatcacaacacagctctttttcaattttatcacagatcaaggac
tccttatcagatgcagacaggatcaagatcctgcagcagcagaatgaagacctgcgccgg
cggctctcccacaccacccacaagatggaggccatggagacggagtttgagaccagccgc
cactacatgcgggaggagatgggtcgtacccgcgacgacctggagaagatgagagacaag
ttccgcagactgcagaacagctacactgcctcccagcgggccaaccaggacctggaggag
aagcttcatgccctgctccgtaaagtggagagggacaagaagaccatggaccaggagata
gtggagctcaccaacaaactcctggatgccaagaacaccattgacaagctggaggagttg
aacgagcgctatcggcaagattgcaatttggccgtgcagctgttgaagtgcaataagtcc
catttcagaaaccacaagtttgcagatctgccctatgagctgcaggacatggtgaacaag
cacatgaaggccagtctgccggataagagttcccagggggcccagggccaggactccgac
accatgagcctgactcccgccgacgtggttcccacctcagtcattgcccgcatcctggag
aagcctgagcctctggtgctcaactctgcccagtccagcagcagcgcaggccggccccag
gcagaggacgtgtttgtgcatgtggacatgactgggcaccaggcaggaggagggggtaga
gagaacgggggtcccggtcacagcagcagggccccagcccagagcagccaggcccaggag
ctcctccagcagaatggcatgtgtcggagccagagcagcctgtcagcagacggccaatca
ggagaggagggtagagagggtggtgccttcgagaagctcaacccctacccagccccccct
ccgccccaccccctctatcccggccgcaaggtgatcgagttctcctcggacgacaaggtg
aagatccccaagaacagccccctgcccaactgcacctacgcaacgcgccaggccatctcc
ctcagcttggtgcagaacgacgaggagaacgagcgccagcgcaccgtgccaaacagcccc
gccgtgtcggacgggggctggcgatctgggacgtcgtcctcctcagggggaggggggcag
cgtgacccctgccgcacccctactcagctagacacagcagaccccctctccaaccagtcc
agcccctttagcagcccccctcagccccccagcgcctttgccagctcaggtagctctgag
gaggacctgctggccaactggcagcgcatgtttgtggagaagatggcaccaccctctgac
ggcaccctggtcaaccgcacctccttcagcagcgagacggtcaaggacctggagaggacc
cggaccggcaagccagtgggcgggggttccgacaggggggcgctacggggggcctactcg
gacggggaggaggggtcctccacccgcagctggacagcaagccgagagtccagcctggac
actgacaccagcagcatggctgacctccgcaccaggagggggcattacggagcagacttc
tccacagaggagagcgagcaactgctgatggccctggacccactggacaacgaccgagac
aacaccagtggcgacaccgtgtcaacggccatcaccgtggagaccagcccggcggaggca
aagaggaatgattttgtggacgagactgggtctgtaggcagctctgcagaggagagagac
atcctgccacaggacttccccgtcatagccccccgggtcctggcagggctagaggactac
acaaagaacacccctcccctttccgcaaactcctccacttccacccccggccgacccctg
aagagcccaaagaggatgggagtccaccacctgcaccgcaaagacagcctgacccgggca
caggagcatggtaacctgctggactga
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