Salmo salar (Atlantic salmon): 106605603
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Entry
106605603 CDS
T04363
Name
(RefSeq) uncharacterized LOC106605603
KO
K09228
KRAB domain-containing zinc finger protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106605603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106605603
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106605603
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2
zf_C2H2_ZHX
zf-C2H2_3rep
Motif
Other DBs
NCBI-GeneID:
106605603
NCBI-ProteinID:
XP_014056904
UniProt:
A0A1S3RYL2
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All DBs
Position
ssa05:67011799..67022065
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AA seq
1350 aa
AA seq
DB search
MERLSSRNNLNMKGKMLVLELMFEKPRTRSRTLNCSCVAGDHDYAKPPPLGSQYMVAMEM
AAEDIVIQETVGAEVELLEDVNKAHKQSPPDREHSENPNFISTPVHLEIPRVSVPRPFSM
PEDSSDDDCDLSGDSVSAYGMHSMELGGKCWECGVQFKSGQELIEHFESHRSKVSTSCNI
CRVTFTRTVSLAMHLVNAHPNSVLHCSNCQLHFSNLWDLNKHIGIHLFTELLNTPLEDIS
NNRLNSSEETLKGQYTLPSALALKHEDNSNDGLNGSEETLKGHYTVPSVVALDHEDTSND
GLNGSEETLNAQCTLPSAVTLDHTYSMESNGRMTKTRHRLEEEEDVKPDPSTLTLGPSIL
TPSLRIRVKLERGVEVDGAPLQSDEGISDGEGGEHSEDTESAGGTDNDRLTESSGETDID
EEDIRLSEEEEEMKSKQGEDRKNDIQSKKEDEDAEMLIDQDGEPSSSERESEFDPEELSD
SDSGSSSTGESSGSSYTPVRTRKAKTQPSRSKLPQTKLSQVKPYYCIYCTKGPYHNMDFH
VKTCNMKGFQCSLCQAVFPTEMAMLDHEVRTHSEAISGQMYTCEFCRQVFPDLAIYKNHN
CPKKDTSSPYVPDPTMGIHCGTGPFTNMDVHLRGCSWKGLTCTECRVLFHNRKALQNHNV
SVHGQLSTMCAVCGRGPFTDMDFHLRSCSRDWSFQCSECKVQFPSEKSLVDHNLQYHSAT
SKTSDQGVCVYCGSGPFYSLDIHMRTCSKQKGLKCSVCKVFFPTESVLADHMVCYHSTPY
HVHRTPCQVQSIPYQVQSTDSETPEGTCLHCGRGPFTSLVIHLRTCSGKKGFKCFVCNVF
FPTETALADHKVLVHSIPSETPDKGTCDHCGKGPFTNLDNHMKTCSKRKCIQCSVCKFFF
PSDVLANHMISYHSTKSRVQSPVTETPDKGACVHCGRGPFTSLEHHMKYCNKQKGIQCVM
CKAYFLTEGSLVDHIVLAHADKLVAQAGGSSATTFSFVPMAISTTSGQQSPSSSTLMCYS
SGNKELKRLAPVPVADQGPSAVGLLTPSGQSTVSLPRVMLSTTTSSQPAVPVVATLLFDN
TGGGPGKMARLVPVAPQTNPPKPHVTAHTQTNTAKPLGQFSNLLQQTVHQAQPVQQQTPR
PTALAMDPIRSPTTPSPRPVSASAPGKITMIRLSPVPTPPLAQSSPLTLAFAPVPLSIMC
MFVNRSKELALEKRMKMSWRSKGTYTCRQCGAISQQPSLSVKHRYLHRGSRRYRCHCGRS
FLRRLHLLRHYLQHAQATRYICTACGETFDGAKCLAQHMVGASNTTRCPGDSITLKLRKE
CRMPFSCHCGQVFCRPAAFLWHKLKNTQRT
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcctatcatcccgcaacaacctgaatatgaaagggaaaatgctcgtcttggag
ttgatgttcgagaaaccgagaaccaggagccggacacttaactgctcttgtgttgctggc
gaccacgactatgcgaaacctcctcctcttgggagccagtatatggttgctatggagatg
gctgctgaagacatagtgattcaggagaccgtgggggcagaggtggagctactggaggat
gtgaacaaagcccacaagcagagtccaccggacagggaacactctgaaaatcccaacttt
atttctactcctgtacacttggagatccccagggtttctgtgccacgcccgttctccatg
ccagaggactcgagtgacgatgactgtgacctgtcaggggacagcgtctctgcttacggc
atgcattccatggagctggggggaaagtgctgggaatgtggcgtgcaattcaagtctggc
caggagttgatcgaacactttgagagccacaggtccaaggtctcaacgtcctgcaacata
tgtcgggtgactttcactcgcacagtatcactggccatgcacctagtcaacgcacaccca
aactcagtcctccattgcagcaactgccagctgcatttcagcaacttgtgggatctcaac
aagcacataggaatacacttgttcaccgagctgttaaatacaccccttgaggacatctca
aataatcgcttgaatagcagtgaagagactttaaagggacagtatactctaccttcagcc
ttggccctcaaacatgaggacaactcaaatgatggcttgaatggcagtgaggagacttta
aagggacattatactgtaccttcagtggtggctcttgaccatgaggacacctcaaatgat
ggcttaaatggcagtgaggagactttaaatgcacagtgtactctaccttcagcagtgacc
ctagaccatacgtatagcatggaaagcaatgggagaatgacaaagacaagacataggctg
gaggaggaggaagatgtcaaaccagacccttccactctgaccctaggcccctccattctg
actccctcactgaggatccgtgtcaaactggagagaggggttgaggttgatggcgccccc
ctccagtcggatgagggtatcagcgatggagagggtggtgaacatagcgaagacactgag
agcgctggaggaacagacaacgacaggttaacagagagcagcggagaaacggatatcgat
gaggaggatatcaggctgagtgaagaagaggaggaaatgaaaagcaaacagggggaggat
aggaagaatgacatccagagcaaaaaagaggatgaggatgctgagatgctgattgaccaa
gatggtgagccctcttcgtctgagcgggagtcagaatttgacccagaagagttatcagat
tctgactcggggtccagcagcactggggaatccagtgggtcttcttacactcctgtacgc
acacggaaagccaagacccagccatcccggagtaagctgccccagaccaagttgtcccag
gtcaagccttattattgcatctattgcaccaaaggaccatatcataatatggactttcat
gtgaagacctgcaatatgaagggctttcaatgctctttatgccaagctgtcttccctacc
gagatggccatgttggaccatgaggttcggactcactctgaagccatatcgggccaaatg
tacacctgtgagttctgccgtcaggtcttccccgatctggccatctacaaaaaccacaac
tgtcccaaaaaagacacatcctccccatatgtccctgatcctactatgggtatccattgt
ggaacagggccattcactaatatggacgttcatttgagaggctgcagttggaaaggcctt
acatgcactgagtgcagagtactcttccataataggaaggccctgcagaaccataacgtt
tcggttcacggacaactttccactatgtgtgctgtttgcggcagagggccattcactgat
atggacttccatttgaggagctgctctagggattggtccttccaatgctctgagtgcaaa
gtccaatttccttctgagaaatccctggtggaccataatcttcaatatcacagtgccaca
tcaaagacctctgaccaaggtgtctgtgtctattgcggcagtggaccattctatagtctg
gacatccacatgaggacctgctctaagcagaagggcttaaaatgctctgtgtgcaaagtt
tttttccctactgaatcggtcctggctgatcatatggtttgctatcacagcaccccatac
catgtccatagaaccccatgccaagtccagagcatcccataccaagtccagagcacagac
tcagagacccctgaaggtacctgtctccattgtggcagaggtccattcactagtctggtt
atccacttgaggacctgctctgggaagaagggcttcaaatgctttgtttgcaacgttttt
ttccctacagagacagccctggccgaccataaggttctcgttcacagtatcccatcagag
acccctgacaaaggtacctgtgaccattgtggcaaggggccattcactaatctggacaac
cacatgaagacctgctctaagaggaagtgcatccaatgttctgtgtgcaagtttttcttt
cctagtgatgtcctggccaaccatatgatttcctatcacagtaccaaatcccgagttcag
agcccagtcacagagacgcctgacaaaggtgcctgtgtccattgcggcagagggcccttc
actagtctggaacatcacatgaagtactgcaataagcagaagggcatccaatgtgttatg
tgtaaagcttactttcttactgagggcagtctggtggaccatattgttttggctcacgct
gacaagctggtcgcccaagctggtgggtcctccgctacaactttctccttcgtacccatg
gctatctctaccacctcaggccagcagagccccagtagctccaccctgatgtgttacagt
agtggcaataaggagctgaaacgactggccccagtccccgtggctgatcagggccccagt
gcagttggcctgctaacaccttctggacagtctactgtgtctctgcctagagtaatgctg
tctaccaccacctcttcccagccagctgttcctgtggtggccaccttgctctttgacaac
actggtggtggtccagggaaaatggccaggctggtcccagtggccccacagaccaaccct
cccaaaccgcatgtcacggcacacacgcagactaacacggcaaagccccttgggcagttc
tctaaccttctgcaacagactgtccatcaggcacaacctgtccaacagcagacacccagg
cccactgccctagccatggaccctatcagatcccccaccaccccatcccctagacctgtc
tcagcctctgccccggggaaaatcaccatgatccgcctctcacctgtccctaccccccct
ctagctcagtcttccccccttacccttgcctttgccccagtccctctaagcatcatgtgt
atgtttgtgaatagaagtaaggagctggccctggagaaacgcatgaagatgagctggcgc
tccaagggcacctacacctgccgccagtgcggcgccatctcgcagcagccctcactcagt
gtgaagcaccgctacctccaccggggctcccggcggtaccgctgccactgtggtaggtcg
ttcctgcggcggctgcacctcctgcgccactacctccagcacgcccaggccacccgctac
atatgcactgcctgcggggagacctttgacggggcaaagtgcctcgcacagcacatggtt
ggagcttccaacacaactagatgtccaggtgacagcataactttgaagctgaggaaagag
tgccggatgcccttctcttgtcactgtgggcaggtgttttgtaggcccgctgcttttctc
tggcacaaactgaaaaacacccaaaggacttaa
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