Salmo salar (Atlantic salmon): 106605659
Help
Entry
106605659 CDS
T04363
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106605659
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Others
Others
106605659
Endosome - Lysosome transport
106605659
Endosome - Golgi transport
106605659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
DUF6085
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
106605659
NCBI-ProteinID:
XP_014057013
LinkDB
All DBs
Position
ssa01:61744782..61823510
Genome browser
AA seq
1043 aa
AA seq
DB search
MPPAQLVVHFDKFLDLSRSDKATLIFDCRTNGFTVILTLTKQYDFNLGAFTESSLWRSVD
YGSTYIKLNNKVGSTLACLYVCPTNKRKIMMLSDPELEHSVLISSDEGASFEKHPINFYM
DGLLFHPTQENWLLASSPDNKVYSTMDFGRKWQLVSENVTPGRFFWAQTGLDREADVVHM
ETHIAKGRAQYVTCRAQRCTESNRQYLFPGHIDQNSLVVQDNYVFVQVTNSGQASYFVSY
MRESFKQIQLPKYCLPKDMHIISTDKKQVFAAVQEWNQNYTYSLYISDSPGVYFTLSLEN
LRTRREPGGNLLVDMYKVEGINGIFFANKLVDHEVKTFITYNKGQTWALLQAPNTDVAGN
SLHCILPFCSLHLHLDMPVNPYLPGRIFSKDSAPGIIVATGNIGTELSSTNLGMFITSDA
GNSWRQIFEEELGVWFLDNGGALVAVSLVATVPIRHIWISLDEGKKWDRHSFSLVPLFLD
GALMQPENHIITFTGHLSRISEWQLIKIDYKAIFSRRCMDGDYQTWNLHNKGEPCVMGEK
QTFMKRRPGNRCMLTQDYSRVISSEPCICRAYDFECDYGYERQADGKCSPAFWFDPNTVP
RSCSTSQNYLNSTGYRKVLSNNCKEGGKDVYSPRKQHCSPRPPRGLRLTTSHGDLTANLG
SNVTFLVHLDDGNSLWTYIQLDFGDGITVMYNLSRRGDGIKHSYRAPGIFRVTAHAENSQ
GYDSSSIFLHITSPVERVYLSAPIVAIRKKEANLTAVVWPVHQRTLTFFWWFENSSESLI
TLGGSIAYTFQKEGMNRVIVQVSSGCNILQDTKVIIVKEFFKSLLLSFSPTLDEHNPDIP
EWREDVGRVVRTAVSQVSGFPEEQLFVSLFPGIPTTAELFILPETQLSEHGKGNEEGLVS
ISDILINALNQGLIQFELKPDTQIIVYITQLTSAPLVDSNPIHSSSAMLMLLSVAFVGLV
AFFIFKFKRKIPWIHVQAEENQEKEPERIGTVGQNNTMSKMKHSEFPSEKELMEKELEAR
TRGENGRNGERVITREFPTCSNV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgcccaacttgttgttcactttgacaaattcctggacttgagcagatcagat
aaagcgactctgatctttgattgtcggactaacggtttcacagtgatcctgaccttgaca
aagcagtatgactttaacttgggtgctttcactgagagttctctctggagatcagtggac
tatgggagcacttatattaaactgaataataaggttgggtcaaccttggcttgcctctac
gtctgcccaaccaacaagagaaagataatgatgcttagcgacccagagctggaacacagt
gtactcatcagttcggatgaaggtgccagcttcgagaagcatcccattaacttctacatg
gacggtctgctatttcatccaacacaggaaaactggctgctggctagcagtcctgacaac
aaggtgtacagcacaatggactttggaagaaaatggcagttggttagtgagaatgtgact
cctggacggttcttctgggcacaaacagggctggacagagaggcagatgtggtccacatg
gagacccacatcgccaaaggacgtgctcagtatgttacgtgccgcgctcaacgatgcaca
gaatcaaacagacaatacctgttcccgggacacatagaccaaaattctctggttgttcag
gacaactatgtgttcgttcaggttaccaattcagggcaggcgagttactttgtgtcctat
atgagggaatcattcaaacaaattcaactacccaaatactgtcttcccaaggacatgcac
atcatcagtacagataagaagcaggtgtttgcggctgtacaggagtggaaccagaattac
acctacagcctgtatatctcagactctccaggggtctacttcactctgtctttagagaac
ctcaggaccagaagagagccaggtggaaatttactggtcgacatgtataaggtagaagga
ataaacggcatattttttgccaacaaattggtggaccatgaagtgaagactttcattacc
tataacaagggtcagacctgggcccttctgcaagcccctaacaccgatgtggctggaaac
agtctgcactgcatcctgccattttgttctctgcatctgcacctggatatgcctgtgaac
ccttacctgcctggacgcatcttcagtaaggactcagcaccagggatcatcgtagccaca
ggcaacattggtacagagctgtcctccactaaccttggaatgtttataacatctgatgcc
ggcaatagctggagacagatatttgaagaagaacttggtgtttggtttcttgacaatgga
ggtgctttagttgcagtgtctttagttgcaacagtacccatccggcacatatggataagt
ctggacgagggtaagaaatgggatcgtcacagtttctctctggttccattgtttctggat
ggagctcttatgcaaccagagaatcacatcatcactttcactggacacttaagtcgtatt
tcagaatggcagctgataaagattgactacaaagccatctttagcaggagatgcatggac
ggagattatcagacttggaacctacataacaagggagagccatgtgtgatgggagaaaag
cagacctttatgaaacggaggccagggaaccgctgtatgctgacccaggactactcccga
gtcatatcctcagaaccatgcatctgcagggcatatgattttgaatgtgattatgggtat
gaacgtcaagctgatggaaagtgttcacctgctttttggttcgacccaaacacggtacca
agaagctgtagcactagccagaattacctcaatagcacagggtacaggaaggttttgtct
aataactgcaaagagggaggaaaggatgtgtactcccccaggaaacagcattgttccccc
aggcctcccagaggcctcagactgaccaccagccatggagacctcactgccaacctgggc
agtaacgtcaccttcctggtgcatctggacgatggaaactcattgtggacatatatccag
ctagactttggggatggcatcacagtcatgtacaacctgagccggagaggcgatgggatc
aaacacagctatagagcacctgggatcttcagagtgacagcacatgctgagaacagccag
ggatatgacagcagctccatattcttacatatcaccagcccagtggaacgtgtgtatctc
tcagctcctattgtggccatcagaaagaaggaagccaacctaactgctgtggtctggccc
gtccaccaaagaacactaacctttttctggtggtttgaaaacagctctgagtccttaata
accttgggtggaagcatcgcgtacacgtttcagaaggagggcatgaacagggtcattgtc
caggtgtcttctgggtgcaacatacttcaggataccaaggtcatcattgttaaagagttc
ttcaaatccctgctgttatcattctctccgactttggacgagcacaaccctgacatccct
gagtggagagaggatgtgggccgcgtggtgaggacagctgtgtcacaggtgtctgggttt
ccagaagagcagctgtttgtatcgttgtttccaggtattccaacaacagcagaactattt
atcctgcctgagactcagttgtctgaacatgggaaagggaacgaagagggcttagtgagt
atatcagacattcttataaatgccctgaaccaaggattgatccagtttgagttgaaacct
gacactcaaataattgtttacatcacacagctaacttcggcacctctggttgattccaac
ccaattcacagtagctcagccatgctgatgttgctatctgtggcgtttgttggtttagtt
gcattcttcatcttcaagttcaaaaggaaaatcccttggatccatgtccaggctgaggag
aaccaggaaaaggagccggagaggatcggcacggttgggcagaacaacaccatgtccaag
atgaagcacagtgagttcccctcagagaaggaacttatggagaaagaactggaggccagg
accagaggagaaaatggaagaaatggggagagagtgatcacaagagagtttcctacttgt
tctaatgtctaa
DBGET
integrated database retrieval system
