Salmo salar (Atlantic salmon): 106605734
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Entry
106605734 CDS
T04363
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sasa03009
]
106605734
Enzymes [BR:
sasa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
106605734
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106605734
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
CCSAP
Motif
Other DBs
NCBI-GeneID:
106605734
NCBI-ProteinID:
XP_014057109
UniProt:
A0A1S3RZ57
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All DBs
Position
ssa05:complement(68782529..68784721)
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AA seq
375 aa
AA seq
DB search
GLDRQDLSFNLITYLLCICVCPTAQLMRNTGVIVANDASADRLKSVVGNIHRLGVTNSMI
CNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPAVKTSKDESDILRLAHLQKELILAAI
DSVNAESPSGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVQTGLDFGKEGFTRFKERRF
HPSLKLSRRFYPHSHNMDGFFVAKLKKFSNTVPTTAVDKDGEEETEPSEAVEVTADSSDE
DGPSKAGSKNKSKKQKPVPGKPAVSQKTTANGKPAKSIGKKTTNPSTLKKGEKPTGQKKA
KIAKMDGGTVKVDGELKKSNTVKTEGETTKESKERSRFEKKRDKQRKSPMQSKKRMGKNK
FNKLKKLLKKEEVGQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gggcttgacaggcaagacttgtcttttaatttgattacttatttattgtgtatatgtgtg
tgtcccacagcccagttgatgaggaacacaggagtgattgtggccaatgatgccagtgct
gacagactgaagagtgtggtgggcaacatccaccgtctgggagtcaccaactcaatgatc
tgtaactatgacgggaggcagttccctaaggtaatgggtgggtttgacagagtgctgctt
gatgctccctgctcaggcacaggagtaatctccaaagaccctgctgtgaagaccagtaaa
gacgagtctgacatcctgcggttggcccacctgcagaaggagctcatcctggcggccatc
gactcggtcaacgctgagtctccctctggaggctatctggtgtactgcacatgctctatc
atggtggaggagaatgagtgggtagtggactatgctctcaagaaaagaaacgtcaaactc
gtccagactggactggactttggcaaagaaggtttcaccagattcaaagagagacgattc
catccctctctgaaactctcacgccggttctatcctcattcccacaacatggacggtttc
tttgtggccaagctgaaaaagttctccaacacggtcccaaccacagcagttgacaaagat
ggagaagaggaaaccgagccatctgaggcagtagaggttacagctgattcctctgatgag
gacggaccatctaaagcagggtctaagaacaagtccaagaagcagaagccagtccctggc
aagccagctgtgtcacagaagaccacagccaacgggaagccagccaaaagcatcggcaag
aaaacaacaaacccaagcaccttgaaaaagggtgagaaaccgaccgggcagaaaaaggca
aagattgctaagatggatggtgggactgtgaaagtggacggagagctcaagaagtccaac
acagtcaaaacagaaggggagacaaccaaagaatcaaaggaaaggagcaggtttgagaaa
aaacgcgataaacagaggaaatcccccatgcagagcaagaagagaatggggaagaacaaa
ttcaataagttgaagaagctgctaaaaaaagaagaggttggacaatga
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