Salmo salar (Atlantic salmon): 106605754
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Entry
106605754 CDS
T04363
Symbol
cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106605754 (cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106605754 (cnot3)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106605754 (cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106605754 (cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
106605754
NCBI-ProteinID:
XP_014057137
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Position
ssa05:69053104..69064257
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AA seq
893 aa
AA seq
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MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKVIETQMERFKVVERETKTKAYSKEGLGLALKVDPAQRE
KEETGNWLTNTIDTLNMQVDQFESEVESLFIQTRKKKGEKEKQDRIEELKRFIERHTYHI
RMLETILRMLDNDSVXVDSIQKIKDDVEYYMESSQDPDFEENEFIYDDLDLEDIPAALVA
TSPTGMGNIEDEMFLHSSSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSDVSQSP
AKNGTSSLLLSFSSSANSGSSSSSSSLVSMAAVVGGNPGIPTSNSLIGSFSSAVQQHQPQ
PPQQPVLQPLQQPQQPQTKPCTPSPPSHPLLSTAPSLPTPISASPNSLPQVSSGHILNSS
LGLGLGLGKVGMTGTSSANSMSGLGLTGMSASLNTMAGLLSGSTHAPYAQAAALGGLGLS
TTTQSSVSVESSSIPTSCTSGVTTNGAGTGLGLLGSSPAHGSLTGGILGLVPGQSVIPGP
PQIPLSPVGAAPGGAMGMMGGNGGSMGPIGGGVGSNAAPARPPSGLKQNGSTSYSAVVAE
STAESAFSTPSQSQSSQPSSLTSSASQPMDNGPSLISSITLPPSSPSPSFSDSIPGGGSL
LNGPHSYTQASEGLKAPEPLSSLKAMAERAALGSGLDGEIPNLHLTDRDIFSGSSAAPGT
PAAPQPSLSEVSIPPSLGVCPLGPTPLSKDQVYQQTMQESAWTHMPHPSDSERIRQYLMR
NPCPTLPFHHQMPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQYLSAKALKKQSWRFHT
KYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagagaaaactccaaggtgaaattgacagatgtttgaaaaaggtagctgaa
ggcgtagaacagtttgaagacatttggcagaagcttcacaatgcagccaatgccaaccaa
aaggaaaaatatgaggcagaccttaaaaaagagattaaaaagctacagcgattgagggat
cagataaaaacatgggtggcatcaaatgagatcaaagacaaaaggcagctagtggagaat
cgcaaggtcatagagacgcaaatggagcggtttaaggtggtagagcgggagacaaagacg
aaggcctactctaaagaaggcctggggctcgccctgaaagtggacccagctcagagggag
aaagaagagacgggaaactggctaacgaatacgatagacactctaaatatgcaggtggac
cagtttgagagtgaggtggaatccctcttcattcaaaccaggaagaagaaaggagagaaa
gagaagcaggatcgcattgaggagctaaagaggtttatagaaaggcatacgtaccacatt
cgcatgctggagaccatcctgcgcatgctagacaacgactcggtgncagtggactccatc
cagaagatcaaggacgacgtggagtactacatggagtcgtcacaggacccagactttgag
gagaacgagttcatttacgacgacctggatctggaggacatccctgcagcgctggtggcc
acctctccgacgggcatggggaacatagaggatgagatgttcctccactcgagcagcact
cccacctccaccacctcctcttcccccatccctccatccccggccacctgcactgctgag
aactctgaggacgataagaagagagggcggtcgacagacagtgacgttagtcagtctcct
gcgaagaacggcacttcctccttgttgttgtccttttcctcgtccgccaattccgggtcc
tcttcttcttcctcctctcttgtctccatggccgccgttgtcggaggcaaccctgggatt
cccacaagcaacagtctaataggaagcttcagcagcgccgtgcaacaacatcagcctcaa
cctccacagcaaccagtcctgcagccactgcaacaaccacaacaaccccaaacaaaacct
tgcacccccagcccacccagccaccccctcctctccaccgccccctctctccccacacct
atctcagcctccccaaactccctgccccaggtctcgtctggtcatatcctcaactccagc
ctaggccttgggttaggcctgggtaaagttggcatgacggggacaagcagtgccaactca
atgtctggtctgggcctgactgggatgtctgcctctctgaacaccatggcaggcctgctc
tctgggtccacccatgccccttacgcccaggcagctgcgttgggaggcctgggtctgagt
accaccacccagtccagtgtctcagtggagagctcctccatccccacctcttgcaccagt
ggagtgaccaccaacggggctgggacaggcctgggcctgctggggtccagcccagcacac
ggctccctgactggggggatcctgggcctggtgcctgggcagagtgtgatccctgggccc
cctcagatccctctcagcccggtcggtgctgcccctggaggggcaatggggatgatggga
ggaaacggaggaagcatggggccaatcggaggaggagttgggtcgaacgcagcccctgcc
agaccgcccagtggactgaagcagaacggaagcacaagttacagtgctgtggtggcagag
agcacagcagagtccgccttcagcacacccagccaatcacagagcagccagccttcctcg
ctgacctcctcagccagtcagcctatggacaacggtcccagcctcatcagctccatcacc
ttgccccccagctctccgtccccctcgttttcggacagtatccccggtggtgggagtctc
ctcaacggaccccactcctacacacaggcctctgagggcctcaaggccccggagcctctg
agttctctgaaggcgatggctgagagagcagcattaggatcaggtctggatggagagatc
cccaacctgcacctcacagacagagacatcttctctggttcgtcggctgcccccggcacg
cccgcggccccccagccctccctatcggaggtgagcatccccccttccctgggggtgtgt
cccctgggtcccactcccctctccaaggaccaggtgtaccagcagaccatgcaggagtct
gcttggacacacatgccgcacccctcagactccgagaggatcaggcaatacctgatgagg
aacccatgccccaccctgccgttccatcatcagatgcccccccaccactcagactctata
gagttctaccagagactgtccacagagactctcttcttcatcttctactacctggagggc
actaaagctcagtacctgtcagccaaggctctgaagaagcagtcgtggaggttccacacc
aagtacatgatgtggttccagaggcacgaagaacccaagactatcactgatgagtttgaa
cagggcacttacatctactttgactatgagaagtggggtcagaggaagaaggaggggttc
acctttgagtacaggtacctggaagaccgagacctgcagtga
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