Salmo salar (Atlantic salmon): 106605822
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Entry
106605822 CDS
T04363
Name
(RefSeq) ubiquitin-like protein ATG12
KO
K08336
ubiquitin-like protein ATG12
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04068
FoxO signaling pathway
sasa04136
Autophagy - other
sasa04140
Autophagy - animal
sasa04621
NOD-like receptor signaling pathway
sasa04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
106605822
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106605822
04136 Autophagy - other
106605822
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
106605822
04622 RIG-I-like receptor signaling pathway
106605822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106605822
04121 Ubiquitin system [BR:
sasa04121
]
106605822
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106605822
Membrane trafficking [BR:
sasa04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
106605822
Ubiquitin system [BR:
sasa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
106605822
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106605822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APG12
ATG8
XendoU
Motif
Other DBs
NCBI-GeneID:
106605822
NCBI-ProteinID:
XP_014057259
UniProt:
A0A1S3RZI5
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Position
ssa05:70427169..70430418
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AA seq
120 aa
AA seq
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MSDNAESPTETQKDELSTPQQPTEDSGTADEKKKIDVLLKAVGDTPIMKTKKWSVEKGRT
VQSLSQFISRFLKMEANEQLFIYVNQSFSPSPDQEVGVLFECFGSDGKLVLHYCKSQAWG
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaacgcagagtctcctacagaaacgcaaaaagatgagctttcaaccccacaa
cagcctacggaagactcggggacggcagacgagaagaaaaaaattgatgtgttgttgaag
gcagtaggagacacccccatcatgaagacaaagaaatggtcggtagagaaagggaggaca
gtgcaatcactctctcagttcatctctcgattcctcaagatggaggccaatgaacagctg
ttcatttacgtcaaccagtcattctctccctcgcctgatcaggaagtaggagtcctgttt
gaatgttttggcagcgatgggaagcttgttctacattattgtaaatctcaagcctggggt
taa
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