KEGG   Salmo salar (Atlantic salmon): 106605827
Entry
106605827         CDS       T04363                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106605827
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sasa03041]
    106605827
Spliceosome [BR:sasa03041]
 Complex A
  U2 snRNP components
   U2 related factors
    106605827
 Complex B
    106605827
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 AAA_8
Other DBs
NCBI-GeneID: 106605827
NCBI-ProteinID: XP_014057265
UniProt: A0A1S3N4F6
LinkDB
Position
ssa05:complement(70344327..70355276)
AA seq 501 aa
MSDFDEFERQLSENKQAQLVEHGACNARIVRSIPGNTPEKDKENRHHRRSPSRSRSRERK
RRSRDKDRRSRDRRGDSKERRPRRSSPSQQQPQEIAVSRSPHRETKKKNKVKKYWDVPPP
GFEHISVMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIP
FGITEESMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGI
IFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKE
LLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQITMENQAIAGLNGMQLGDKKLL
VQRASVGSKNATLTSINQTPVTLQVPGLMNSSMTQMAGLPTEVLCLMNMVAVEELVDEEE
YEEIVEDVRDECSKYGQVKSIEIPRPVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKF
ANRVVVTKYCDPDAYHRRDFW
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgtcggatttcgacgaattcgagagacaactgtctgaaaacaaacaagctcagttggta
gagcatggcgcttgcaacgccaggatagtgcgctcgattcccgggaacaccccggagaag
gacaaggagaaccgccaccaccgtcgctccccctctcgcagccggagcagagagaggaag
aggaggagcagagacaaggacagacgcagcagggatcgccgtggagacagcaaggagcgc
agaccgagacgcagctcaccatcccaacaacaaccccaagagattgctgtaagtcgttcc
ccgcaccgtgaaacgaagaagaagaacaaagtgaagaagtactgggacgtccctcctcct
ggctttgaacacatcagtgtgatgcagtacaaagccatgcaggctgcgggtcagatccca
gccacggccctgctgcccaccatgaccccagacggcctggccgtgacccccactcctgtc
cctgtggtgggaagccagatgaccagacaggcccgtcggctttatgtggggaacatcccc
ttcggcatcacagaggagtccatgatggatttcttcaatgctcagatgcgtctgggcggt
ctcactcaggctccaggaaaccccgtcctcgctgttcagatcaaccaggacaagaacttt
gccttcctcgagttccgctcagtggatgagacaacccaggccatggcgttcgatggcatc
atcttccagggacagagtctgaagatccgccgtccccatgactaccagcctctgcccggc
atgagcgagaaccccagcgtctacgtgcctggcgtcgtgtccacagtggtgcctgactcg
gcccacaagctgttcatcgggggcctgcccaactacctgaatgatgaccaggtgaaggag
ctcctgacatcgtttgggcctctcaaggcctttaacttggtcaaggatagtgccacaggt
ttgtctaagggttatgcgttctgtgagtatgtagatgtcaacctgaacgaccagatcacc
atggagaatcaggccatagcaggactcaacggcatgcagctgggagataaaaagctcctg
gtgcagagagccagcgtgggatccaagaacgccactctgacaagtataaaccagaccccg
gtgacgctgcaggtgccgggcctgatgaacagctcaatgacccagatggccggcctgccc
actgaggtgctgtgtctgatgaatatggtggctgtggaggagctggtggatgaagaggaa
tacgaggagatcgtggaggatgtgagggacgagtgcagcaagtacggccaggtcaagagc
atcgagatccccagacctgtggatgggctggaggtccctggcactggcaagatctttgtg
gagttcatgtcagtgtttgactcccagaaggccatgcagggtctgacgggcaggaagttt
gctaaccgggtggtggtgaccaaatactgcgaccctgatgcctaccaccgccgagacttc
tggtag

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