Salmo salar (Atlantic salmon): 106605835
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Entry
106605835 CDS
T04363
Name
(RefSeq) trichohyalin-like
KO
K20684
Rho guanine nucleotide exchange factor 5
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106605835
Membrane trafficking [BR:
sasa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
106605835
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH3_9
PH
LbR_Ice_bind
Motif
Other DBs
NCBI-GeneID:
106605835
NCBI-ProteinID:
XP_014057281
UniProt:
A0A1S3RYH5
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All DBs
Position
ssa05:complement(70702036..70716489)
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AA seq
1988 aa
AA seq
DB search
MGTKRPSLTPFDTFDPSNQSASYLNPQPISQICRETSPRPGTMARTDRERERIREEEWRR
EREMERLKDKTRNRRKGMEPGPRERNREKDCSPIFRGREEEREWRERERERAGERRANGR
PTSNLDIRNDREKERKKGDTFPTIIKNSKERDRRMSAFVEEDVGKEGTRQLERQKGTEMD
DWERERETASKIQRYRDAERDFQRYREREREKERIRAKEDREKNGGRPMEDKTVRRRERA
KEVETDFRERRRERFSKGNDLWSKREGYIDGERERPKLWQGEREVRGREGDSQNYSDSEG
RDGRREGNTEGQRDTRSEGDSDGEKWKERVRDDNRRELKHLHSKSEGDTEGNTSWDRVRE
KEKERQKWRGGEMYRERDGRKDAYRQRVRDGGRDIDGERDMDRYRERDRRKAREVERERD
GVREGGRQENGPRERRDPEKDREKTQPNVTGERGKRMDGERFRERERYSKGEDEERRRRE
KRDRETDPKREGGADGASQSPSETAPRVPPRAQSSGEWSSDIERERKWRRGRESNEEKES
EGEKDVDRGQRECSERERPDRVRGREEGEEETIPKRPEQRKMWLEPQKVRYNKDSSLEDE
VIERERDRDTNRWRDRSEEEDRSVEQRTGREKERKTEGEGQEDGVVEQRKSIDEERETER
EGGRERYLERGLHVDEDDETEAWRSYSRGEEHQTDSDGEREERWQRDRETERENVTDNTE
GDREEEEGSDRYAEWEGERDRIHSSEDGFITVSSGGEEEFEDCKEFLEVGFTNHIRQPVS
FQGSEEEMERGRGRRHERERERTEERTEQKDDAVEGEVNDGKGKKQPTYVFCVIGQTLPR
SKPNQTAVLGDMKSERTNQNPGYGHRDSDDITHVPHENPSRDGDQGAEDERKIVRDEIHV
PKEERTDTEESSIVDVSHTTLERESGERLKVMEENPYAEIERRRSSETEKLLKEWRERHK
EYTETRESDPTDRRRTDPEIGTSSHPSGEYHHHGVAVVDQATSDQNNPGVMSPEEAVAIQ
IRISGAWSTEEEAKRHSQASHMKWAKNVLSEILGSSEEHALGNPQPESQGGQKVSQTARG
TERVEEELEEEKDETPEWGEASTVYATVQKRTKRGRKSVEARLAEREAEPGKVEDERGTG
EKLTDMHAEALTAMLGDGKPIDMHAALTLHNTHGDTPTDRQGEEVEDNNVCADRQTDSHI
HIQVEMVTEVEGETEKGVEVGDEVHILDAEKDANAQKEEDLFLSVSNTLYKPTSCPSLIY
NPDSEQPIIPIEEKTVEEGEKERTVGEGEENSVVEGEENSVVEGEENSVVEGKQERRIED
WTDDRGKVGEATEERKVEREEEKGVGGEEERMREGREESKKTGGGGVKSTCSFQDLGTDV
RYRRRGFHKTTERRNEEEEEGRGDARDRRTRIFQVSDEEEVSVNWGDADLRNVTDTIRID
RMNSKFYNSQLYQQYSETAQNREILSQSCSDALSIYEELPVPLSPVPSSLAPSLPLARRP
LPRLPPVIHPHSLSHSGSTSSGTSAKFLPIPQPPQAPQAPPARPSSPRLSISLTQSPRLW
QEIPEVRNSAEFGELTDNQRRLQEVQFEVVTSEASYCRSLDIVVDHFVKSKQLGELLTTQ
DRSWLFSRLADVRAISHSFLLKLEERVESDMMHFTVCDIIARHCQRFKKVYVPYLTNQSY
QDATYQRLMDENQGFRRVVEKLERSPVCQRLPLRSFLILPFQRITRIKLLVQNIVKRTAQ
GTEEEVQAIKAMKLLERLIQESNDSITQMKSIESLVSLSARVGFECRTLPLVSQSRRLVR
EGPVTEMMDFSLKETERSVYLHLFNDYLLLSLHKEGGRFTVIDHAPVSELRAENCRVKLH
SLEKNLFRLHLNKKALLLSTDTQGDKLRWISAVSRPHPVIDYSTAQDFTQMQCVRAFVAH
QPDELSLEKAEVILVHQQSSDGWVEGTRLSDRHRGWTRESHLETIASLRVRQRNLLDALK
ITTATAAV
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atggggaccaaacgccccagtctgactccctttgacacatttgatccatccaatcaaagc
gcttcctacttgaaccctcagccaatcagccagatctgccgcgaaacaagtcccagacct
ggaactatggcccggacagacagagagagggagaggatccgagaggaggaatggaggaga
gaaagagaaatggagagattgaaggacaaaacaagaaatagaagaaaagggatggaaccc
ggaccaagagagaggaacagagagaaggactgttcccccatattcagagggagggaggag
gaaagggaatggagagagagagaaagggagagagcgggagagagacgtgccaatggaaga
cctacttcaaatctggacatcaggaacgacagagaaaaggagagaaagaaaggagacacg
tttcctacaattataaaaaatagcaaagagagagacagaagaatgagtgcatttgtggag
gaagatgtggggaaagaaggaacgagacaattggagagacagaagggaacagagatggat
gactgggagagagaacgagagacagcatcaaagattcagcggtatcgagatgcagagagg
gacttccaaaggtacagagagagggagagggagaaggagagaatcagggcaaaggaggac
agagagaaaaatggagggaggcccatggaggataagacagtgagacggagggagagagcg
aaggaagtggagacagatttcagagagaggagaagagagaggttctcaaagggcaatgac
ctatggagcaaacgagaaggttatatagatggagagcgagagaggccaaaactctggcag
ggagaaagggaagttagaggaagagagggagattcacagaactattcggatagtgagggc
agggatggaaggagggaaggaaatacagaaggacagagggacaccaggagtgagggagac
agtgatggagagaagtggaaagagagagtgagagatgacaacagaagagaactgaaacat
ctgcacagtaaaagtgagggggacactgaggggaacacatcatgggatagagtgagagag
aaagaaaaggagaggcagaaatggagagggggggagatgtacagagagagggatggaagg
aaagatgcttatagacagagagtgagggacgggggcagggacattgatggagagagggac
atggacagatacagagagagagacaggagaaaagcgagggaagtggagagagagagggat
ggggtgagagaagggggcaggcaagagaacggaccaagggaaaggagggatccggagaaa
gatagggagaaaacacagcccaatgtaacaggagagagagggaagcggatggacggagag
agattcagagagagggagagatattccaagggggaggatgaagagaggaggcgcagggag
aaaagggacagagagacagatcccaaaagggagggaggagcagacggagctagtcaatcg
ccgagtgagacagccccaagggtgccaccacgagcccagagcagcggagaatggagcagt
gacatagagagggaaagaaaatggagaagaggaagagaaagtaatgaagagaaggagtca
gagggagagaaggatgtggatagggggcagcgagagtgtagtgaaagagagagaccagat
agagtgagggggagagaagaaggagaggaggagacgataccaaagcgccctgagcaaagg
aagatgtggctagaaccacagaaggtcagatataacaaagactcctctttagaggatgag
gttatagagcgagaaagagatagggacactaacagatggagagatagaagtgaagaagag
gacagatccgtggaacaaaggacaggcagagaaaaagagaggaagacagagggagaagga
caagaggatggggtggtggaacaaagaaagtccatagatgaagagagagaaactgagagg
gagggagggagggagaggtatttggagagagggttacatgtagatgaagacgatgagaca
gaagcctggaggagttatagcagaggagaggaacaccagactgatagcgatggagagaga
gaggaacgctggcaaagggacagggagacggagagagagaatgtgacagataacacagag
ggtgacagagaggaagaagaaggaagtgatagatatgcagagtgggaaggagagagggat
agaatccattcctctgaggacggctttatcactgtgtccagtggtggagaagaggagttt
gaggactgcaaggaattcttggaagttgggttcactaatcatatcaggcaacctgttagc
tttcaggggagcgaggaagagatggagagaggtagagggagaagacatgaaagagagcga
gaaagaacagaagagcgaacagagcaaaaagatgatgcagtggagggagaggtgaatgac
ggaaaggggaagaagcaacccacctatgtattctgtgtgattggacaaacactgcccaga
tcaaaacccaatcagacagcagtcctgggtgacatgaaatcagagcggaccaatcaaaat
cctggatatggtcatagggacagtgatgacatcacacacgtccctcatgaaaacccttcc
agagatggagaccaaggggctgaggatgagagaaaaatagtgagggatgagatccacgtg
ccaaaggaggagagaacagacacagaagagagctccatagtggacgtcagtcacaccacc
ctagaacgagagagcggagaacgactgaaggtcatggaggagaacccatacgctgagata
gagcgaaggaggagctctgagaccgaaaaactcctcaaagagtggagagaaagacataaa
gagtacacagaaacaagagagagtgacccaacagacaggaggaggacagacccagagata
ggtacatcttcacatcccagtggagagtaccaccaccatggggtcgctgtagttgaccaa
gccacctctgaccagaataaccctggagtgatgagcccagaggaagctgtggccatccaa
atccgtataagtggagcctggagcacagaagaggaggccaagcgccactcccaggcctca
cacatgaagtgggccaagaacgtattgagtgagatccttggcagctcggaggaacacgcc
ctcggcaacccccagccagagtcacagggaggtcaaaaggtcagccagactgcgagaggg
accgagagggtagaagaggagctagaggaagaaaaggatgagacgccagagtggggagaa
gcctcaaccgtctacgccacggttcagaagaggacgaagcgtgggaggaagtcggtggag
gcgaggctggctgaacgggaggcagagccagggaaggtggaggatgagagaggtacaggg
gagaaactaacagacatgcatgctgaggctctcacagctatgcttggtgatggcaaaccc
atagacatgcatgctgccctgaccctacacaatactcatggtgacacacctacagacaga
cagggagaggaggtggaagataacaatgtgtgtgcggacagacaaacagacagtcatata
catatccaggtagagatggtgacagaggttgagggtgagacagagaaaggggtcgaagtt
ggggacgaggttcatatactggatgcagagaaagatgcgaatgcccagaaagaggaagat
ctgtttctctctgtgagcaacaccctgtacaaaccaaccagctgccccagccttatatac
aaccctgattcagaacaacctatcatccccatagaggaaaagacggtggaagaaggggag
aaagagaggactgtgggagagggggaagagaatagtgtggtagagggggaagagaatagt
gtggtagagggggaagagaatagtgtggtagaggggaagcaggaaagaaggatagaagat
tggaccgacgacagggggaaagtgggagaggcgactgaggagaggaaagtggaaagggag
gaggagaagggggtaggaggggaagaggagaggatgagggagggcagggaagagagtaaa
aaaacgggaggagggggggtgaagagcacttgtagtttccaagatttgggcaccgatgtt
cggtataggaggcgggggtttcacaagacaacagaaagaagaaacgaggaagaagaagaa
ggaagaggagatgcaagggatcgcagaacaagaatattccaggtgtcagatgaggaggag
gtgagcgtcaactggggagacgcggacctgaggaatgtcacggataccatcagaatagat
aggatgaactccaaattttacaattcccagctctaccagcagtacagtgagacggctcag
aacagggagatcctcagtcagtcttgctctgacgccctctccatctacgaggagctccct
gtccccctgtcccccgtaccctcctccctggccccctcgctccctctggcccgcaggccc
ttaccccgtctccccccagtcatccacccccactctctgtcccactctggctctacctcc
agtggcaccagtgccaagttcctgcccataccacagccgccccaggcaccccaggccccc
ccggccaggccttcctctccccgcctctccatctccctcacccagtcccccagactgtgg
caggagatccctgaggtcaggaacagtgctgagtttggggagctgactgacaaccagagg
cgcctgcaggaggtgcagtttgaggttgtaacttcagaagcgtcgtactgtcgtagtctg
gatattgtggtggatcactttgtcaagtctaagcagctcggggagctgttgactactcag
gacaggagctggctgttctccaggctggctgatgtccgagccatcagccacagttttctg
ttgaagctggaagagagggtagaatctgatatgatgcactttaccgtgtgtgacatcatt
gctcgccactgtcaacgcttcaagaaggtctacgtgccctacctcaccaaccaatcatat
caagatgccacttaccagagactcatggatgagaaccaagggttcaggcgggtagtggag
aagttggaacgcagtccagtgtgtcagcgtcttcctcttcgctccttcctcatcctcccc
ttccagaggatcacacgaatcaaactccttgttcagaacatcgtgaagagaacagcccaa
ggcacagaggaggaggtccaggccatcaaagctatgaagctactggagagattgatccag
gagagcaatgacagtattactcagatgaagagcatcgagtcgctggtctctctcagtgcc
agagtgggctttgaatgcaggactctccccctggtcagtcagtctcgtaggctggtgaga
gagggaccggtgactgagatgatggatttctctctgaaggagacagagaggagtgtctac
cttcacctcttcaatgactacctgctgctgtcgctgcacaaagaagggggcaggttcacg
gtgatagaccatgctccagtgtcagaactgcgagctgagaactgtcgggtcaaactgcac
tctctagagaagaaccttttccgcctccaccttaacaagaaagccctgctacttagcacc
gacacacaaggtgataaactgcgatggatctcagctgtctccaggccccatcctgttatt
gactattctacagcacaagacttcacacagatgcagtgtgtccgagccttcgttgcccac
caaccagacgagctgtccctggagaaggctgaggtcattctcgtccaccagcagagcagc
gacggttgggtggaggggaccaggctgtcagacagacacagaggatggactcgtgagtcc
cacttggaaaccatagccagcctcagggtccgacagcgcaacctgctggacgctctaaag
attaccacagccacggctgcagtatga
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