Salmo salar (Atlantic salmon): 106606068
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Entry
106606068 CDS
T04363
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106606068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106606068
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106606068
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
ANAPC3
TPR_8
TPR_12
TPR_14
ARM_TT21_N
BCLP
Motif
Other DBs
NCBI-GeneID:
106606068
NCBI-ProteinID:
XP_014057628
UniProt:
A0A1S3RZI6
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Position
ssa05:complement(76296210..76317189)
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AA seq
588 aa
AA seq
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MADNNTDQEKAIAANALEAFTAGNYEESLKHLGKLQELNKEDYKIALNKAIAEFYKSGQT
TTCTLKQTLIAMKNQVHTSMEDIDGLDDVENSLLYYNQAIIHYHMRQYSEAIAIGERLYQ
FLEPFEKFALAVCFLLVDLYLLTYQPEKALHLLAVLEKLSVQGNNKNGKGEVIFQAQCKF
YIHRDPVVEAADLIQDNLRELTGGQSVNSANKDGRNQKAEFIGMIEAAKSKMHQYKVRAY
IQMKSSKACKREIKSVMNTAGNSASSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGAIK
TGECVRCMFWNNLGCIHFAMGKHNLGIFYFKKALQENDHTCAQLGDGGATGNGQSKQFSG
IPMCALLANKRYELLYNCGIQLLHIGRPLAAFDCLMDAVQVYHSNPGLWLRLAECCIAAN
KGSLEQDNKGLPSKKGIVQAIVGQGYHRKIILASQSTQNTIYSDGQSAAIPVASMEFAAI
CLRNGLVLLPDHQQQENKAENGPKTPSQSGSTESGSENSDACSGKGQEGDKFLSAAPSSP
LRKQEVENLRCSLLACSAYVALVLGDNLMALNHAEKLLHQTKLSGSLK
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcagataacaacacagaccaagaaaaagcaatagctgcaaatgcgttggaggcgttt
acggctggaaactatgaggaatctttgaaacaccttgggaagctgcaagagttgaacaag
gaggactacaagattgctttgaataaagcaatagctgaattctacaagagcggccaaacc
accacatgcaccctgaagcagactcttattgcaatgaaaaaccaggttcacacttcaatg
gaggatattgatggtttggatgatgtagaaaacagtctgctctactacaatcaagctatc
attcactaccacatgagacagtactccgaagctattgctattggagagaggctgtaccag
tttctggagccgtttgagaagtttgctctggcggtctgcttcttgctggtggatctgtac
ctgctaacataccagccagagaaggccctccatctccttgctgtgctggagaaactgtct
gtacagggaaacaacaagaacggcaaaggggaggtaatatttcaggcacagtgcaagttc
tacattcacagggacccggtagtggaggcagcagacctcattcaggataatctcagggag
cttactggaggacagagtgtcaacagcgccaataaagatggtcggaaccagaaggcagag
ttcattggcatgatcgaagcggcaaaatccaaaatgcaccagtacaaagtgcgagcgtac
attcagatgaagtcatcaaaggcatgcaaaagggagatcaagtctgtgatgaacacagca
gggaattctgcttcctcactcttcctcaagagtaactttgagtacctgagaggaaactac
cgcaaagcagtgaagctcttaaacagctccaacatcgcagagcaccctggggccatcaaa
acaggtgaatgtgtgcgctgtatgttctggaacaatctgggttgcatacactttgccatg
gggaaacacaacctaggcatattctacttcaaaaaggccctgcaggagaacgaccacaca
tgtgcacagctgggggacggcggggcgacgggtaacgggcaatctaagcagttctcgggc
atccccatgtgtgcgctgctagccaacaagcgttatgagctgctgtataactgtgggatc
cagctgctgcacatcggccggcccctggcagccttcgactgtctgatggatgctgtgcag
gtgtaccactctaaccctggcctctggttacggttggctgagtgctgcatcgctgccaac
aagggtagcttagaacaagacaacaagggtcttccgagtaaaaaaggtatcgttcaggcc
atcgttgggcagggctaccatcgcaagatcatcctggcgtcacagtccacccagaacaca
atctacagtgatgggcagtctgcagccattccggtggccagtatggagtttgcagcgatc
tgtctgaggaacggcctggtcctcctccctgatcaccagcagcaggagaacaaggcagag
aacggccccaagacacccagccagtcaggcagcacagagagcggctcagagaacagcgac
gcctgcagtgggaagggtcaagaaggagacaagttcctttctgcagcaccgtcttcacct
ctgaggaaacaggaggttgaaaacctcaggtgttccctcctggcctgcagtgcctacgtg
gccctggtgttaggagacaacctgatggccctgaaccatgcagagaagctccttcaccag
accaagctgtctggatcactcaagtaa
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