Salmo salar (Atlantic salmon): 106606197
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Entry
106606197 CDS
T04363
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04144
Endocytosis
sasa04517
IgSF CAM signaling
sasa04530
Tight junction
sasa04810
Regulation of actin cytoskeleton
sasa05100
Bacterial invasion of epithelial cells
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106606197
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106606197
09144 Cellular community - eukaryotes
04530 Tight junction
106606197
09142 Cell motility
04810 Regulation of actin cytoskeleton
106606197
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106606197
05100 Bacterial invasion of epithelial cells
106606197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106606197
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106606197
Membrane trafficking [BR:
sasa04131
]
Others
Actin-binding proteins
Arp2/3 complex
106606197
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
106606197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WDR55
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Rax2
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
106606197
NCBI-ProteinID:
XP_014057802
LinkDB
All DBs
Position
ssa06:complement(383978..394288)
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AA seq
372 aa
AA seq
DB search
MSLYSFGLEPLSCHAWNKDRTQIAVSPNSSVVIIYEKKGNEWAKIHELTEHSGRITGIDW
APDSNRIVTCASDRNAYVWTLKDKVWKPTLVLVRINRAATFVKWSPLENKFALGSGARLI
SVCYFEKENDWWLSKHIKKSIRSTVMCLDWHPNNILLAAGSSDFHCRIFSAYIKEIEDKP
GPTAWGAKMPFGEMLLETKDCGGWVHSVSFSPSGDHLAWVAHNSSISVADATQGKEVTQL
TTDRLPLVSVLYVSPTEMVAAGHDCCPFQFSYKGPGSLKFVKKLDIPKQTSRGSMSAMQH
FRNLDKKATDDESNELGCLHQNSITQLCIVSGTKAHVDKYSSVGLDGAMVLWDFKVLPTY
TTYKRVCGHPVK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtacagctttgggctggagcctctctcctgccatgcctggaataaggacagg
acacagattgctgtcagccccaacagcagtgtggtgatcatctatgagaagaaggggaac
gagtgggccaagatccacgagctgactgagcacagtggacgaatcacaggcatcgactgg
gctccggattcgaaccgcatcgtgacgtgtgcatcggaccgtaatgcgtacgtgtggaca
ctgaaggacaaggtgtggaagcccactctggtgttggtgaggatcaaccgggctgctacc
tttgtcaagtggtcccctctggagaataagtttgccctgggcagcggagctcgcctcatc
tctgtctgctacttcgagaaggagaacgactggtggctcagtaagcacataaagaagagc
atccggtccacggtgatgtgtctggactggcaccccaacaacatcctgctggctgctggg
tcctctgacttccactgcaggatcttctctgcctacatcaaggaaatcgaggacaagcca
ggcccgacagcgtggggggctaagatgccatttggggagatgctgctggagaccaaggac
tgtggaggttgggtacacagtgtctccttctcccccagcggagaccacctggcctgggtc
gctcacaacagcagcatcagtgtggccgacgccacccaggggaaagaggtgactcagctg
acaacggaccgcctacctctagtgagcgtgctctatgtgagccccacagagatggttgcc
gcgggccatgactgctgtccgtttcagttctcctataagggcccaggcagtctgaagttt
gttaagaagctggacatccccaagcagacctctaggggcagcatgtccgccatgcaacac
ttccgcaatctggataagaaggctactgatgatgagagcaacgagctgggctgcctgcac
cagaacagcatcactcagctgtgtatcgtgtcaggaactaaggcccacgtggacaagtac
agcagtgtgggtctggacggagctatggtcctctgggacttcaaggtactgcctacatac
accacatataaaagagtatgtggacaccccgtcaaatga
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