Salmo salar (Atlantic salmon): 106606228
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Entry
106606228 CDS
T04363
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04136
Autophagy - other
sasa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106606228
04136 Autophagy - other
106606228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106606228
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106606228
Membrane trafficking [BR:
sasa04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
106606228
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106606228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_MABP1-WDR62_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML
WD40
BCAS3_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_WDR19_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
106606228
NCBI-ProteinID:
XP_014057847
UniProt:
A0A1S3S0S7
LinkDB
All DBs
Position
ssa06:1216972..1221248
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AA seq
258 aa
AA seq
DB search
METGEGADGPGGPGEPGAGPGTELTGLGCASFNQDSTSLSVGTKTGYKLFSVTSVDKLDC
IYESETPDVYIVERLFSSSLVVVVSLSIPRRMNVYHFKKGTEICNYSYSNNILSVRLNRQ
RLVVCLEESVYIHNIKDMKLLKTLLNTPSNPSGLCALSINHSNSYLAYPGSSTIGEIIVY
DANNLSTVTMIPAHDSPLAALTFNSSGTKLASASERGTVIRVFSIPEGQRLFEFRRGMKR
SEFTQYNINCINTLYYTT
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggagacgggagagggagcagacggtcctggcggaccgggtgaaccaggagccgggccg
gggacagagctgacggggcttggctgcgcctctttcaaccaagactccacgtcattgtca
gtgggaaccaagacgggctataagctgttctctgtgacctcagtggacaaactggactgc
atctacgagagcgagaccccagatgtgtacatcgttgagcggttgttctccagcagtctg
gtggtggtggtcagtctctccatacccagacggatgaacgtctaccacttcaagaaggga
acggagatctgcaattacagctacagtaacaacatcctctctgtcaggctcaacagacag
aggttggtggtgtgtttggaggagtcagtgtacatccacaacatcaaagacatgaagctg
ctgaagacccttctcaacacgccctccaacccctcaggtctgtgtgctctgtccatcaac
cattccaactcgtacctggcctacccaggcagctccaccatcggagagatcatagtttat
gatgccaacaacctgagcactgtgacaatgatcccggcccatgacagtcccctggctgct
ctcaccttcaactcgtcaggcaccaagctggccagcgcctcggagaggggtactgtaatc
cgtgtgttctccatcccagagggacagcgtctgtttgagttccgcagagggatgaagagg
tcagagttcacacaatacaacataaactgtataaacacactttactacacaacatag
DBGET
integrated database retrieval system
