Salmo salar (Atlantic salmon): 106606329
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Entry
106606329 CDS
T04363
Symbol
TLR
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sasa04054
]
106606329 (TLR)
Pattern recognition receptors [BR:
sasa04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
106606329 (TLR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
LRR_EndoS
DHU1_N
Motif
Other DBs
NCBI-GeneID:
106606329
NCBI-ProteinID:
XP_014057959
UniProt:
A0A1S3S1B8
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Position
ssa06:complement(4406139..4409933)
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AA seq
1027 aa
AA seq
DB search
MRAMFSHPAVLFLWIQCTSGWMHPKCQIYDRGEDLGDFPTWSCNYLPRHAEHYTAACKYV
TAIEEDLLGLPPNINTFCISMANGENRSMSLGFFSQFQDLDYLYIKGCFTQILPSGKSHL
PNLQHLHLDGMGSGCCDCHIGPHTFRDLVKLSNLTVWGYRLSAMAPDVFHGMTHLQSLII
REPCVDDLSEILCRIMNIKSLIKLNIEAPEIQSLNQSNCSILNTNESMKPVFNNLAISDL
LFGEITHIQEGSLAWLQNLTGLSGAFSQEVLLRLPLSGIQQIQYFSCSGSNEIDIESICS
VVFLLSIKKIYFHNANLSSLSMSSVELCIGLEYMHLRKPGYFHSTPYLEWHFISGLKNLI
QLTINGLKDNRLDICSFQKQPIKWLTKLTLRLNKLQMLFAKQFSCLINLQYLDLADNLIS
NIEDFAFLGLTNLESLDIGINNITQINTNTFFGLQLTKLTLRLNKLHILFAKQFSCLVKL
QYLDLTHNLISNIEDFAFLGLTNLESLDITRNKITQINANTFFGLHSLTWLDLRNNPLIH
NIEAMSFTHLTSLRQVFLGQLNNPLTEPVIKLNLTLIFGGILSQLTHLYISSAMRPMQLI
IGSNITSKHNLSLQLKGQTVSFEDCDRPFFQSVTHLHADAEEFLCGSEFMGKYFTSVETF
DYRSKLSAKSVDLTSINQLIHLRKLTLRQVDLLIQRSADNIFHNLTKLEVLELDNCRIYS
LEGSLTKDFKSLKTLYLCIENIYNVFYSFIEPLSSLKYLILPQIQIFCSCDNAWLITWAK
GYRQVEVIMFTPYTNPVMSALEDLICLSDNGIDTPNFVKYTEANCTTEVGFVLFAATGLG
VLFFMLVVLVHNLAGPYLLPLYHITLGWLSEAMRSNTRGRYHYDAFVSYSGKDERWVVEE
LLPNLEQSGPPFLRLCLHSRDFQLGKDIVENITDSLYRSRHTLCLVSRHYLRSNWCSLEM
KLATSRLQVEQRDILLLVFLEKIPPRRLSAHHRLARLVKTRTYLDWPQDPDQHQAFWDRL
WSKLSEA
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgagagctatgttttcccaccctgccgtcctgttcctgtggattcagtgtactagtgga
tggatgcatcctaaatgccagatttatgacagaggtgaagacttgggagactttcccacc
tggtcctgcaactacctacctcgtcatgcagaacattacactgctgcctgtaaatatgtc
acagccatcgaggaggatctacttggacttccccctaatatcaataccttctgcatatct
atggcaaatggcgaaaatagatccatgtctctgggctttttctctcagtttcaggatctg
gactacctgtacattaagggctgttttactcaaatccttccgtctgggaaaagccacctt
ccaaatctgcaacatttacatttggatggaatgggctctgggtgctgtgattgtcatatt
gggcctcatacattcagagatctagtcaagctgagtaatttgaccgtatggggttataga
ctatcagcaatggccccagatgttttccatggcatgactcatttacaaagtctcatcatt
cgtgaaccctgtgtagatgatttgtcagagatactatgcagaataatgaatataaagtca
cttataaagctaaatatagaagcaccagagatacaatcgttaaaccaatcaaactgctcc
atcttaaacaccaacgaaagcatgaaacctgtttttaacaatctagcaatctctgactta
ttatttggtgaaataacacatatacaggaaggttcactggcttggctccagaacctcaca
ggattatctggggctttcagccaggaagtcctactgcgccttcccctgtctgggattcag
caaatccagtacttcagttgctctggtagcaatgaaatagatattgaaagtatctgtagt
gtagtgtttttgctttcaatcaagaaaatatattttcacaatgccaatttaagcagcctc
tctatgtccagtgttgaattgtgcattgggctagaatatatgcatttacgtaaacctggc
tatttccattctactccatatttggaatggcattttatttccggtctcaaaaaccttatt
caattaacaataaatggcctgaaagacaacagacttgatatttgctccttccaaaaacaa
ccaataaaatggttaacaaaattgactttaaggttgaacaaactacaaatgctttttgct
aaacaatttagctgtcttattaacctgcagtatttggatttagcagataatttaatttca
aacattgaagactttgctttcctgggactgacaaatctggaatccttagacattggaata
aataatattacacagataaatacaaacacattttttggtttacaactgacaaaactgact
ttaaggttgaacaagctacacattctttttgctaaacaatttagctgtcttgttaagctg
cagtatctggatttaacacataatttaatttcaaacattgaagactttgctttcctggga
ttgacaaatctggagtccttagacattacaagaaataagataacacagataaatgcaaac
acattttttggtttacatagtttgacatggttagacctcaggaacaatccacttattcac
aacattgaggcaatgtctttcacacacctcacgtctctaagacaagtgtttctcgggcaa
ttgaacaatccactaacagaacctgtgatcaagctgaatctgacacttatatttggtggc
attctgagtcagctgactcatctgtacattagttcagctatgaggccaatgcagttgatt
atcggcagtaacatcacatctaaacacaacctgagtctccagctcaaaggccagacggtg
tcatttgaggactgtgacagacctttctttcagtctgtaacccatcttcatgctgatgct
gaagaattcctttgtggatctgaattcatgggaaagtacttcacgtctgtggagacattt
gactacagatctaagctttcagctaaaagtgttgatttaacatcaattaatcagctgatt
cacctgaggaaactgactctacgtcaggtggatcttttaatacagcgttctgccgacaac
atttttcacaacttgaccaaactggaggttctcgaacttgacaactgcaggatttattct
ttggaggggagtttaactaaagactttaaatccttgaaaacattgtatttgtgtatcgag
aacatttataatgtattctacagctttattgaacctctctctagccttaagtatttgata
cttcctcagatccagatcttttgcagttgtgacaatgcttggctcattacatgggccaaa
gggtacaggcaggttgaagtgatcatgtttactccgtatactaatcccgttatgtctgct
ttggaggacttgatatgcttgtcggacaatggaatagacacacctaattttgtcaagtac
acagaagccaactgcacaacagaggttggctttgtgctctttgctgcgactggcctggga
gtcctgttcttcatgctggtggtgttggtccataacctggccggcccctacctcctcccc
ctctaccacatcacccttggctggctgtcggaggccatgcgatccaacaccagggggcgc
taccactatgatgcgtttgtctcctatagcgggaaggacgagcgctgggtggtagaggag
ctgcttcccaatctggagcagagcggtcctcctttcctgcgcctctgtctgcacagcagg
gacttccagctggggaaggacattgtggagaacatcacagacagcctttaccggagccgc
cacaccctctgcctagtcagccgccactacctacgcagtaactggtgctccctggagatg
aagctggccacctccaggctgcaggtggagcaaagggacatcctcctccttgtcttcctg
gagaagatcccccctcgccggctttctgcccaccacaggctggctcgcctggtgaagacc
aggacttatctggactggccccaggaccccgatcagcaccaggcattctgggacagactg
tggtctaaactgtctgaagcgtga
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