Salmo salar (Atlantic salmon): 106606382
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Entry
106606382 CDS
T04363
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03030
DNA replication
sasa03410
Base excision repair
sasa03420
Nucleotide excision repair
sasa03430
Mismatch repair
sasa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106606382
03410 Base excision repair
106606382
03420 Nucleotide excision repair
106606382
03430 Mismatch repair
106606382
03440 Homologous recombination
106606382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sasa03032
]
106606382
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106606382
Enzymes [BR:
sasa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106606382
DNA replication proteins [BR:
sasa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
106606382
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
106606382
MMR (mismatch excision repair)
DNA polymerase delta complex
106606382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-C4pol
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
106606382
NCBI-ProteinID:
XP_014058012
UniProt:
A0A1S3S169
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All DBs
Position
ssa06:complement(6867516..6877477)
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AA seq
645 aa
AA seq
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MWVLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDA
YLPLRLLQKLMCVINYMEMARVTGVPLTYLLSRGQQIKVVSQLLRQAMKQGLVMPVVKPE
GGEDYTGATVIEPEKGYYSVPIATLDFSSLYPSIMMAHNLCYTTLLQKGSAEKLGLTPED
FIKTPTGDLFVKSSVRKGLLPDILEDLLSARKKAKAELKNETDPFKKQVLDGRQLALKIS
ANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEQTKQLVESKYTIANGYQADAKVIYGDT
DSVMVKLGVDTVSRAMEVGREAAEWVSSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSS
SADTHDKMDCKGIETVRRDNCTLVANLINTCLQTILIDRDPQGAVAHAKEVISDLLCNRI
DISQLVITKELTRTAQEYAAKQAHVELAERMKKRDAGSAPQLGDRVPYVIIKAAKGVAAY
MKSEDPIYVLENNIPIDTQYYLEQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLT
SRVGGLMAFATRRSACIGCRAVLKNDAAVCDFCKKKESELYQKEIFHLSTLEERFSRLWT
QCQRCQGSLHEDVLCTSRDCPIFYMRKKVQKDLDDQEKLVSRFGW
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtccttcaggtgctgctgagggactacaaactgcgctcgtatacgctcaatgcc
gtcagcttccacttcctgcaagaacagaaggaggatgttcagcattctatcatcacagat
ctgcagaatggtaatgagcagacgcggaggcgcctggcggtgtactgtctgaaggatgcc
tacctgcccctgcgtctgctgcagaagctgatgtgtgtgatcaactacatggagatggcc
agagtcaccggggttcccctcacctacctgctctccagaggtcagcagatcaaagtggtg
tcccagctactgcggcaggcaatgaaacaggggctggtcatgccagtggtgaagcctgag
ggaggtgaagactacactggagctacagtcattgagccagagaaaggatactacagcgtt
cccatcgccaccctggatttctcctccctgtatccctccatcatgatggcccacaacctc
tgctacaccaccctgcttcagaagggctcagcagagaagctgggtctgaccccagaggac
ttcatcaagactcccacaggagacctgtttgttaagagctcggtgaggaagggacttctg
cctgatatcctggaggacctgctctctgccaggaagaaggccaaagcggagctgaaaaac
gaaacggatcctttcaagaaacaggtccttgacggccgacagctcgctctgaaaatcagc
gccaactccgtctatggttttacaggggctcaggtgggcaagctgccctgccttgagatt
tcacagagtgttactgggtttggcagacagatgattgagcagaccaaacagcttgtggaa
tccaagtacaccatcgccaacggttaccaagctgatgccaaggtcatctacggggacaca
gactccgtcatggtcaaactgggcgtggacactgtgagcagggccatggaggttgggagg
gaggcggcagagtgggtctcctcccacttcacccctcccatcaaactggagtttgagaag
gtgtactacccctacctgttgatcaacaagaagcgctacgcaggtctctacttctcctcc
agcgccgacactcacgacaagatggactgcaagggtatcgagacggtccgcagagacaac
tgtaccctggtggccaatctgatcaacacctgcctgcagaccattctgatagacagagat
ccccagggtgcggtggcccacgccaaagaggtgatctctgacctgctgtgtaaccgcatc
gacatcagccagctggttatcaccaaggagctgactcgcacagcccaggagtacgctgcc
aagcaggcgcatgtggagctggccgagaggatgaagaagagagacgcgggtagcgccccc
caactgggagacagagttccctatgtcatcatcaaagctgccaaaggagtagcagcatac
atgaagtctgaggacccaatctatgttctggagaacaacattcccattgacacccagtac
tacctggaacaacagctctccaagccactgctccgcatctttgagcccatcctgggagag
agcaaagcagagagcgtcttactgaagggggatcacacgcgctgtaagacagtgttgacc
tccagggtgggggggctcatggccttcgccaccaggaggagcgcctgtatcggttgcaga
gcagtgctgaagaacgatgcggctgtgtgtgatttctgtaagaagaaggagtcggagctg
taccagaaagagatcttccacttaagtactctggaggagcgcttctctcgcctgtggaca
cagtgtcaacgctgtcagggctctctccatgaggatgtactctgtaccagccgggactgt
cccatattctacatgaggaagaaagtgcagaaagacctggatgatcaggagaagctggtg
tctcgctttggatggtga
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