Salmo salar (Atlantic salmon): 106606607
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Entry
106606607 CDS
T04363
Name
(RefSeq) nuclear pore complex protein Nup85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106606607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106606607
03036 Chromosome and associated proteins [BR:
sasa03036
]
106606607
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106606607
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106606607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
4HB_MCP_1
Motif
Other DBs
NCBI-GeneID:
106606607
NCBI-ProteinID:
XP_014058411
UniProt:
A0A1S3S1X5
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Position
ssa06:complement(15595499..15606913)
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AA seq
651 aa
AA seq
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MEEVDVEPTTTPIPGFDSNQKHLGFVWGPGDILVYETIYKASGGSAGGCPFVHEVRKDED
IYSPILRKLFNESHHIFVGLQRIREDLPSKNKKPQFVSISKNYRSVIRACMEELQQVAVS
TQDAALATQYGNQVSILLAVELIWNLCEVLFIDAAPAGSLVLHLLDWVRLHKADVDEKAR
EVLASESPAEHQAYWDVVISYVLQGRMDEARQVLVKQATLQPAARAMFKLLDNLLMKMPI
FNPGETQTLTEFDVKWRHWREEVDRCLQDQSFASNPHLEDICKILVGDEDVLLEHKELLS
TWYHFLVTRLLFSHPTVKPTELHYYAQSSMHMFLDTRSVPEPLDSILLAAFEFDIHQVIK
DCSIALNNWWFVGHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLAVD
YFDHCPEFGRVYLELQIERVPLDTERKALKVIRICEQRQMTEQVRSICKIMAKKALRNNR
LGSALSWSIRAKDAAFATLISERFLQDYCAKGTFSDLDLIDNLGPAMLLSDRLTFLGKYR
EFHRLYGEKRFSDAAKLLLSLMTAKIAPRSFWMTLLTDALPLLEQKEVIFSADQTHKLMF
CLEELTSGKSVPNPDRPMQDEDIETTKIELLRLALARNLAMAIVKEGTVEV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtagatgtggagccaacaactactcctatccctgggttcgacagcaaccaa
aaacacttgggatttgtgtggggtcctggagatatcctggtttatgagaccatttacaaa
gcatcaggtggatctgcagggggttgtccctttgtccatgaggtcaggaaagatgaggac
atctattcccctattttgcgtaaactcttcaatgagtcccatcacatttttgttggtctg
cagaggatcagagaggatctgcccagcaagaacaagaaaccccagtttgtcagtattagc
aagaactacaggtctgtgattcgagcatgtatggaggaactccagcaagtcgcagtttct
acacaagatgcagcgttggctacacagtatggaaatcaggtgtcaatcctgctggcagta
gagctgatctggaatctttgtgaagtgttgttcattgatgcagctccagctggctccctt
gtgctccacctcctcgactgggttaggctgcacaaggctgacgtggatgagaaggccagg
gaggtgctggcgagtgagagccccgcagagcaccaggcctactgggacgtggtgatcagc
tacgtgctgcagggccggatggatgaggccaggcaggtcctggtgaaacaggcaactttg
cagcctgcagccagggccatgttcaaactgctggacaacctgctcatgaaaatgcccatc
ttcaatcctggtgagactcagaccctgacagagtttgatgtaaagtggagacactggcgc
gaggaggtggaccgctgtctccaggaccagtcctttgccagcaacccccacctggaggac
atctgtaagatcctggttggtgatgaggatgttctcctggagcacaaggagctgctgagt
acctggtatcacttcctggtcaccagactgctgttctcccaccccactgtcaagcccaca
gagctgcactactacgcacagtctagcatgcacatgttcctggacacgaggagtgtccca
gagcccctggacagcatcctgctggcagcctttgagtttgacatccaccaggtcatcaag
gactgcagcattgctctcaacaactggtggtttgtggggcatctgactgacctgctggac
cactgtaaactgctccagtctcacaacctacattttggctccaacctgagggagtttcta
ctgctggagtacgcctcaggactcttcacccatcacagcctgtggcagctggctgtggac
tactttgaccactgtccagagtttggccgtgtgtacctggagctacagatcgagcgtgtt
cctctggacacggagcgcaaggccctgaaggtgatcaggatctgtgagcagaggcagatg
actgaacaagtgaggagcatctgtaagatcatggccaagaaggccctgaggaacaacaga
ctgggctctgctctctcctggagcatcagagccaaagatgctgccttcgccaccctcata
tcagagaggtttctccaggactactgcgccaaagggaccttctctgatctggacctgatt
gacaacctgggtccagccatgctgctcagtgacaggcttacttttctagggaagtaccgt
gagttccatcggctgtacggcgagaagcgtttctcggacgccgccaagctcctcctctcc
ctgatgacggccaagatcgccccacgttccttctggatgactctgctgaccgatgccctg
cccctgctggagcagaaagaggtgatcttctctgctgatcaaactcataagctgatgttc
tgtctggaggagctgacctcagggaagagtgttcccaacccagacagacccatgcaggat
gaggacatcgagacgaccaagattgagctcctgcggctagcgctagcccgtaacctggcc
atggccatagtgaaggaggggacagtggaagtttga
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