Salmo salar (Atlantic salmon): 106606791
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Entry
106606791 CDS
T04363
Name
(RefSeq) zinc finger SWIM domain-containing protein 8-like
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106606791
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
106606791
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
106606791
NCBI-ProteinID:
XP_014058625
UniProt:
A0A1S3S2L1
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Position
ssa01:57582575..57636856
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AA seq
1980 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSGGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRMRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTYEQIIGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDDMVVLWRLA
VLDPTMSPQRRLELASQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCYFNWEVAY
PLPGITYCSADKKSASFCWARAVQQQRGAKAGLAGDTSELGGGGGRSGSSEGGGGDYKGR
SPQQEVAVRPKETIVSKRKGLSAGGGGGVLVRLGGSVSLSLEEGSSKGMYKGAGSSSSIG
GKTKLAQGGRSSGGGSGGVGGKHQAAKRRTSSEDSSLEPDMAELSLDDGSSLALGAEASN
TFDFTPPPPEMLPSPSPLLREPHKYSGGGKGAGNMPKERSFEGKRVTLAAILAATESQAA
FPLKENATVVMEAAVALEKEVEVEAEMEVNGNKEATPAGDARLSTSVAVVTVTAAAAKPP
RGGRRETGAGAVALPNQSPAAGAGGDPVGEDDYRAYYLNAASEEGAERVPENNHEEEPDI
FAGIKPLEQEGQMEVLFACAEALHAHGYSNEACRLAVELAGDLLANPPDLKVEQPQTKGK
KSKVSTSRQTQVATNTLVKTSFLLTVLSERLELHNLAFSTGMFSLELQRPPASTKALEVK
LAYQESEVVALLKKIPLGLVEMTSIRDRAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPV
CTVVSPTGSRPPSRNRNNDMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDL
ALALMITYKDDQSKLKKILDKLLDRESQTHKPQTLSSFYSSKPAASSQRSPSKHAAHNAH
GHGGATGGVSKHAPNATAAAGSSSVQAVAAGGAAGQLAGSGVQNNATPGEGVSEAREQAD
GTQPASCDQPSEAVPFKPEGTVPSRLALGGRGAYSGRCWGSPVRQKKKHTGMASIDSSAP
ETTSDSSPTLSRRPLRGGWAAASWGRGQDSDSISSSSSDSLGSSSSSGSRRAGGGARAKS
TDTSRYKGRRPECHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTQPSASGGHQ
GPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWD
GHLTPPEVASLADRASRARDPNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQVHVR
YSSVLQKTHRTTHDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGGSGA
QREGPGRCRANGGAGRRPPETGHGVTDNSGNMESSGVATVTASVTAAAVVPVISVGSTIY
QSHALPGSAMAHPHSQGLHPYTTIQAHLPTVCTPQYLGHPLQHVPRPTVFPLSGGAYPQC
VCVPSQGMHPAFIGAQYPFSVATGPHPPMAATAVTFPGIPVPSMTQIAVHPYHTETGLPL
STTVAGAASFSSFYPVGGVHSGTTIQAIQGSSLPGMSSQPVSLVSAPFPSEDEQHSQPIS
QQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNYVYQ
FCVGAAKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIHHRLI
HLTPADYDDFVNIIRSARGAFCLTPVGMMQFNDVLQNLKRGKQTKELWQRISLEMATFSP
NT seq
5943 nt
NT seq
+upstream
nt +downstream
nt
atggaactaatgttcgccgagtgggaagacggagaaaggttctccttcgaagattctgac
cggttcgaggaggactcgctctgctccttcatatcagaagctgagagtctgtgtcagaac
tggaggggatggagaaaacagtcgggtggaccaaattctcctacagttaagattaaagat
ggtcaggtcatccctctggtggagctttcagccaagcaggtggcgttccacatcccgttt
gaggtggtggagaaggtctaccctcctgtccctgagcagctgcagctacgcatcgcctac
tggagcttccctgagaacgaggaggacatccggctgtactcatgtctggccaacggcagc
ccagatgagttccagcgaggggagcagctgtacaggatgagggctgttaaagaccctctg
cagataggtttccacctcagtgccaccgtggtatcgccccaggctggccaatcaaaaggg
gcgtacaatgtggctgtcatgtttgaccgctgccgcatcacctcctgcagttgcacttgc
ggggccggtgccaagtggtgcgcccacgtggtggccctctgcctcttcaggatccacaac
gcgtctgccgtgtgcctgcgagcccccgtgtcagagtccctgtcccggctgcagagggac
cagctgcagaagtttgcccagtacctaatcagcgagcttccccaacagattttgcccaca
gcccagaggctcctggatgagcttctgtcctcccagtccacagccatcaacacagtgtgt
ggggctccagaccccactgctggcccctcggcctctgaccagagcacctggtatctagat
gagtccacgctcagtgacaacatcaagaagacgctgcacaagttctgtggcccctctcct
gtggtcttcagtgacgtcaactccatgtacctgtcatccacggagccaccggcggcggca
gagtgggcctgtctgctgagacctctgagagggcgggagcctgaggggatctggaacctc
ctgtctatcgtcagggagatgttcaagaggagggacagcaacgctgcacctctactagag
atcctcactgagcagtgtctcacttatgaacagattattggctggtggtacagcgtgcgt
acgtcggcgtcccacagcagtgccagcgggcacacggggcgcagtaacgggcagtctgag
gtggcagcccacgcctgcgccagcatgtgtgatgacatggtggttctgtggaggctggct
gtgctagaccctaccatgagccctcagaggcgtttggagctggcctcccagctcaagcag
tggcatctgaaagtgattgagattgtgaagcgagggcaacatcgcaagtccctggacaaa
ctgttccagggcttcaagccagccgtggagtcctgctacttcaactgggaggtggcctac
ccactgccaggcatcacctactgcagtgctgacaagaagagcgcctccttctgctgggcc
agggcagtgcagcagcagagaggggccaaggctggcctggctggagacacctctgaactt
ggaggaggaggggggagatctggcagctctgagggaggtgggggagactacaagggcaga
agtccccaacaagaagtggccgtcaggcccaaagagaccattgtgagcaagaggaagggg
ttgtcggccgggggcggaggaggggtcctagtgcggctagggggcagtgtctctctctct
ctagaggagggcagtagtaaggggatgtacaaaggcgcaggttcctcctcgtccattggg
ggtaagactaagctggcccagggggggaggtcatcaggagggggatcaggaggggtaggg
ggaaaacaccaagcagcgaagcgccgcaccagcagtgaggacagctccctggagcctgac
atggccgagctgagcttggatgacggctccagtctggcgctgggcgctgaggccagtaac
acctttgacttcacacccccgccgcccgagatgctgccctcaccaagcccgctactcaga
gagccacacaaatacagtgggggagggaaaggggccggaaacatgcccaaggagcgctcc
tttgaaggcaaacgtgtcactcttgctgccatcctggctgccactgagtcacaggccgcc
ttccccctcaaggagaacgccactgtcgtcatggaagcggctgttgccttggagaaggag
gtggaagtggaggcagagatggaggtgaatggaaataaggaggcgacccccgctggagac
gctcggctctccacctcggtcgctgttgttaccgtgactgctgctgccgccaagccaccg
cgtggtgggcgccgagaaactggcgctggagccgtagctctgcccaatcagagcccagcg
gcaggggcagggggagaccctgttggagaggatgactaccgggcctactacctaaatgca
gcctctgaggagggggcagagagagtgccagagaacaaccatgaggaggaaccagacatc
tttgctgggatcaagccactggagcaggagggccagatggaggtgctgtttgcatgtgca
gaggccctccacgcccatggctacagcaacgaggcctgcagactggcagtggagctggct
ggagacctgctggccaaccctccagacctgaaggtggagcagccccagacgaagggtaag
aagagcaaggtgtccaccagcaggcagacccaggtggccaccaacaccctggtaaagacc
tccttcctgctgacggtgctgagcgagaggctggagctccacaacctggccttcagcacg
ggcatgttctccctggagctgcagaggcccccagcctccaccaaggccctggaggtcaag
ctggcctaccaggagtcagaggtggtggctctgctgaagaagatccctctgggcctggtg
gagatgacgtccatacgggacagggccgagcagctccgagacgggaacttctgtgactac
aggcctgtcctgcccctcatgctggccagcttcatatttgatgtgctgtgtaccccagtt
tgtacagttgtctcccccacaggttcccgtcctcccagccggaaccggaacaatgacatg
cctggagacgaggagctgggctttgaggctgctgtcgcagcactgggtatgaagaccaca
gtgagtgaggcagagcaccctctgctgtgtgaggggaccaggagagagaaaggagacttg
gctctggctcttatgatcacatacaaggatgaccagagcaagctgaaaaagatcctggac
aagctgctggacagagagagccagacccacaagccccaaaccctgagctccttctactcc
agcaagccagctgccagcagccaaaggagcccgtccaagcacgctgcccacaatgctcac
ggacacggaggtgccaccggaggggtgtccaaacacgcccccaacgccacggctgcagct
gggtcctcctctgtgcaagcggtggctgctggtggggcagcaggacagctggcgggcagc
ggggtgcagaacaacgccacacccggagagggcgtcagtgaggccagagaacaagcagat
ggcacccagcctgcgtcgtgtgaccagccgagtgaggcggtcccattcaagcccgagggc
acggtgcccagccgcttggcgctgggaggacggggggcatacagcgggcgctgctggggc
tctcctgtccgccagaagaagaaacacacaggcatggcgagtatcgacagcagtgctcct
gagaccacctcagacagctcccccaccctcagccgacgtccactcagagggggctgggct
gcggcctcctgggggaggggccaggacagtgacagcatcagcagctcttcctctgattcg
ctgggctcctcctcatccagcggctctcgcagggccggaggcggagctagggcaaagagc
acagacaccagcaggtataaagggcgtcgtcccgagtgccatgcaccccatgtgcccaac
cagccatcggaggcggcggctcacttctactttgagctggccaagacggtgctgatcaag
gccgggggcaacagctccacctccatcttcacccagccctcagccagcgggggccaccag
ggtccccaccgcaacttgcacctctgtgccttcgagatcggcctgtacgccctgggcctg
cacaactttgtctcgcccaactggctatccaggacctactcctcccacgtctcctggatc
acaggccaggccatggagattggcagtgctgccctcaacatcctggtggagtgctgggat
gggcacctcacccctcctgaggtggcatcactggcagacagggcatcacgggcgcgggac
cccaacatggttcgcgctgcggccgagctggctctgagctgcctgccccatgcacacgcc
ctcaaccccaatgagatccagagggccctggtgcagtgcaaggaacaggtacatgtccgg
tactcttcagttctgcagaagacacatcggactactcatgacaatgttatgctagagaaa
gcctgtatggctgtagaggaggcagccaaggggggcggtgtgtaccctgaggttctgttt
gaggtggcccaccagtggtactggctctatgagcagacagtaggagggggctcaggggcc
cagcgcgagggcccgggacgctgcagggccaacggtggagctgggagaaggcccccggag
acgggtcacggtgtaacggacaacagtggcaacatggagtcctctggtgttgccacagtg
actgcctctgtgacagcagcggctgtggtgcccgtcatctctgtaggctccaccatctac
caatcacacgccctgcctggctctgccatggcccacccccactcccagggcctgcacccc
tacactaccatccaggcccacctgcccaccgtctgcaccccccagtacctggggcacccg
ctgcagcacgtcccccggcccactgtgttccccttgtcagggggtgcgtacccacagtgt
gtatgtgtgccctcccagggaatgcacccggcctttatcggtgcccagtacccgttctcg
gtggccaccggcccccatccgcccatggcagcaactgcggtcaccttccctggtattccc
gtgccgtccatgacccagatcgccgtccacccgtaccacaccgagaccggcctgcctctg
agcaccactgtagcaggagccgcgtctttttcctctttctatccagtaggtggcgtccat
tcaggcaccacaatccaggccattcaggggtcatctcttcctggtatgtcttcccagccc
gtctcattggtcagcgcccccttcccatctgaagacgagcagcatagccagccaatcagc
cagcagggtcttcactacctgcactcagcctacagagttggcatgctggctttggagatg
cttggaaggagggctcacaacgaccaccctaataacttctcccgcagccccccatacacg
gaggatgtcaagtggctcctgggactggctgcacggctaggtgtgaactatgtgtaccag
ttctgtgtgggtgcggctaagggtgtactcagccccttcgtccttcaggagatcatcatg
gaggctctccagagactcaaccccgcccacatccatgcccacctccgcacgcccgccttc
catcagcttgtgcagcgctgccagcaggcctatctacagtacatccaccaccggctgatc
cacctgaccccggccgactacgatgactttgtcaacatcatccgcagcgcccgcggggcc
ttctgtttgacccctgtgggaatgatgcagttcaacgacgtgcttcagaacctgaagagg
ggcaagcagaccaaggagctgtggcagcgcatctctctggagatggccaccttctcccca
tga
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