Salmo salar (Atlantic salmon): 106606818
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Entry
106606818 CDS
T04363
Name
(RefSeq) nucleolar transcription factor 1-like
KO
K09273
upstream-binding transcription factor
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106606818
03021 Transcription machinery [BR:
sasa03021
]
106606818
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
106606818
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
106606818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
HMG_WDHD1
NOA36
Motif
Other DBs
NCBI-GeneID:
106606818
NCBI-ProteinID:
XP_014058662
UniProt:
A0A1S3S2S9
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All DBs
Position
ssa06:22331855..22340445
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AA seq
571 aa
AA seq
DB search
MSKFREDHPDLVESMAKKGSNVPEKPRTPQQLWYSHEKKAFLKTHADATTKDIKDSLGKQ
WTQLSDKKRLKWIAKSLEMHKAYEEVMKGFIETHPELNMSNEDIVKSTLTKAERHLKDKS
DGRPDKPPPNGYSMFCAELMSSMKDVPSTERMVMCSQQWKLLKQNEKDGYQKRCEQRKKE
YEVEMNRFLCSISEEEQQRVLGEQKMIGFKKGSGGSKKKSRAKPSPEKPKRPISAMFIFS
EEKRPKLQQERPDLSDSELTRLLARMWNELSDKKKEKYKRLETVLKAESVKKGHEERSRL
PDTPKTAQDIWQQSVIGDYLARFKNDRPKAQKAMEATWNTMEKKEKIMWIKKAAEDQKRY
ERELSEMRSPATIIASGKKMKFDGEPKKPPSNGYQKFSQEMLSNGELNHLPMKERMGEIG
GRWQRQPQKEKDRYKKIAEEKQKLYKVELERWLASLSSQERNVYKEYNSQKRKTPVKPGG
TAAKVKAKVTKKSDTEDEDDDDDEEEEKEAASSDNDSSSAEDSEEEDDDDDNEEDDDDDD
DDEEAEDKENKSEGSSSSDSSSVETSDSDSD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagttcagggaggaccatcccgacctggtggagagcatggcaaagaaaggttct
aatgtgccagagaaacccaggacgcctcagcagctatggtacagtcacgagaagaaggcc
ttcctcaaaacacacgcagacgcgaccaccaaagacattaaagacagtcttgggaagcag
tggacacagctgtcagacaaaaagagactcaagtggattgccaagtccctggagatgcac
aaagcatatgaggaggtgatgaagggcttcattgagactcacccagagctcaacatgagc
aacgaggacatcgtcaagtccaccctcaccaaggctgagagacatctgaaggacaaatct
gatggcaggccagacaaaccacccccgaatggttactccatgttctgtgctgagttgatg
tccagtatgaaggacgtgcccagtacagagcgcatggtcatgtgcagccagcagtggaag
ctgctgaaacagaacgagaaggacggctaccagaaacgctgcgagcagagaaagaaagaa
tacgaagtcgagatgaaccggtttctttgtagtatatcagaggaggagcagcagcgtgtg
ctgggggagcagaagatgattggctttaagaagggcagcgggggcagcaaaaagaagagc
agagcaaagcctagcccagagaagcccaaaaggcccatctcggccatgttcatcttctct
gaagagaaacgtcccaagctgcagcaagagcgaccagacctgtctgacagtgagctcacc
aggctgctggcacgcatgtggaacgagctctcagataagaaaaaggagaagtacaagcgc
cttgagacggtcctgaaggcagagtctgtgaagaagggacacgaggagcgcagccggctg
ccagacacccccaagactgcacaggacatctggcagcagagcgtcataggagactacctg
gccaggttcaagaacgaccggccaaaagcccagaaagccatggaagccacttggaacacc
atggagaagaaggagaagatcatgtggatcaagaaggcagctgaggaccagaaacgatac
gagagggaactaagtgagatgcgctctcctgcaaccattattgcctcagggaagaagatg
aaatttgacggtgaacccaagaaacccccatcgaatggctaccagaagttctctcaggag
atgttgtccaacggagagctgaaccacctccctatgaaggagcgcatgggggagatcggg
ggccgctggcagaggcagccccagaaggagaaggaccgctacaaaaagatcgctgaggag
aaacagaagctgtacaaagtagagctggagcggtggctggcgagcttgtcctcacaagaa
agaaatgtgtacaaggagtacaactcacaaaaaagaaaaaccccagtgaaaccaggaggc
actgcagccaaagttaaggccaaggtaaccaagaagtcggacacagaggacgaggatgat
gatgatgacgaggaggaagagaaggaggctgcctcatcagataacgattcgtccagtgca
gaggacagtgaggaggaagatgatgatgacgataatgaggaagacgacgatgatgacgac
gatgatgaggaggcggaggataaagagaacaagtcagagggaagtagcagcagtgattca
agctcagtggagacgtcggactctgattcagactga
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