KEGG   Salmo salar (Atlantic salmon): 106606965
Entry
106606965         CDS       T04363                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03013  Nucleocytoplasmic transport
sasa03015  mRNA surveillance pathway
sasa03040  Spliceosome
sasa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106606965
  09122 Translation
   03013 Nucleocytoplasmic transport
    106606965
   03015 mRNA surveillance pathway
    106606965
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    106606965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    106606965
   03041 Spliceosome [BR:sasa03041]
    106606965
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106606965
    TREX complex
     106606965
Spliceosome [BR:sasa03041]
 Complex C
  Other components
   EJC/TREX
    106606965
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106606965
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 106606965
NCBI-ProteinID: XP_014058947
UniProt: A0A1S3RBI7
LinkDB
Position
ssa06:27711690..27715092
AA seq 263 aa
MADKMDMSLDDIIKQNRQQRGGAGGRGGGRGRGRGGSGGGRGGGVGRGAAGGFGGRGGGS
GPMRNRPNLSRGRARPTPYSRPKQLPDKWQHDMYGNHGFNASVGGGAGVETGGKLLVSNL
DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG
RPMNIQLVTSQIDTQRRPPMQGMNRGGGMNRARGGGFRGMQRGRGAGRGGGRGRGGRGGS
TKPLSAEELDAQLDAYNARMETS
NT seq 792 nt   +upstreamnt  +downstreamnt
atggccgataagatggatatgtctctagacgacatcatcaagcagaacaggcagcagaga
gggggcgcaggaggccgtggtggtggaagaggacgtggccggggaggctctggcgggggc
cgaggtggtggtgttggccgtggagcagctggaggctttgggggccgaggtggaggatcg
ggccccatgaggaaccgaccgaacctgagccgtggcagagcaagacctacgccatacagc
aggcccaagcagcttcctgataaatggcaacacgacatgtacggcaatcatggcttcaat
gccagtgttgggggtggcgctggtgtggaaaccggagggaagcttcttgtctccaatctc
gactttggtgtttcagacgcagatattcaggagctctttgcggagtttggtacactgaag
aaggcagctgtccactatgaccggtcgggcaggagcttaggcactgcagacgtccacttt
gagaggaaagcagatgctctaaaagctatgaaacagtacaacggtgtaccacttgatggg
cgtcccatgaacatacaactcgtcacatcacagatcgacacacaaagacgaccacccatg
cagggtatgaaccgaggcggtggcatgaacagggctcgtggtggtgggtttagagggatg
cagagaggacgtggagcaggtcgtggaggaggcaggggccgaggtggccgtgggggaagc
actaagccactttccgctgaagagctggatgcccagctagatgcctacaatgccaggatg
gaaacaagctaa

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