Salmo salar (Atlantic salmon): 106606979
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Entry
106606979 CDS
T04363
Symbol
THOC4
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
sasa03015
mRNA surveillance pathway
sasa03040
Spliceosome
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106606979 (THOC4)
09122 Translation
03013 Nucleocytoplasmic transport
106606979 (THOC4)
03015 mRNA surveillance pathway
106606979 (THOC4)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106606979 (THOC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106606979 (THOC4)
03041 Spliceosome [BR:
sasa03041
]
106606979 (THOC4)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106606979 (THOC4)
TREX complex
106606979 (THOC4)
Spliceosome [BR:
sasa03041
]
Complex C
Other components
EJC/TREX
106606979 (THOC4)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106606979 (THOC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
106606979
NCBI-ProteinID:
XP_014058985
UniProt:
B5XA68
A0A1S3S3N8
LinkDB
All DBs
Position
ssa06:complement(28003306..28006767)
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AA seq
256 aa
AA seq
DB search
MADKMDMSLDDIIKQNRQQRGGAGGRGGRGRGRGGSGGGRGGGGVGRGTTGGGFGGRGGG
SGPMRNRPNLSRGRARPTPYSRPKQLPDKWQHDMYGNHGFNASVGGSGGGAGVETGGKLL
VSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGV
PLDGRPMNIQLVTSQIDTQRRPPMQGMIRVRGMNRGRGGGLEGCREDVEQVVEEAGAEVA
AGEALSHFPPKSWMPS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggccgataagatggatatgtctctagacgacatcatcaagcagaacaggcagcagaga
gggggcgcaggaggccgtggtggaagaggccgtggccggggaggctctggcgggggccga
ggtggtggtggtgttggccgtggaacaactggtggaggctttgggggccgaggtggagga
tcgggccccatgaggaaccgaccgaacctgagccgtggcagagcaagacctacgccatac
agcaggcccaagcagcttcctgataaatggcaacacgacatgtacggcaatcatggcttc
aatgccagtgttgggggcagcgggggtggtgctggtgtggaaaccggagggaaacttctt
gtctccaatctcgactttggcgtttcagacgcagatattcaggagctctttgcggagttt
ggtacactgaagaaggcagctgttcactatgaccggtcgggcaggagcttaggcactgca
gacgtccactttgagaggaaggcagatgctctaaaagctatgaaacagtacaacggtgta
ccacttgatgggcgtcccatgaacatacaactcgtcacatcacagatcgacacacaaaga
cgaccacccatgcagggtatgatccgagttcgtggcatgaacaggggtcgtggcggtggc
ttagagggatgcagagaggacgtggagcaggtcgtggaggaggcaggggccgaggtggcc
gcgggggaagcactaagccactttccgccgaagagttggatgcccagctag
DBGET
integrated database retrieval system
