Salmo salar (Atlantic salmon): 106607022
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Entry
106607022 CDS
T04363
Name
(RefSeq) ras and Rab interactor 2-like
KO
K23687
Ras and Rab interactor 2/3
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106607022
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
106607022
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
SH2
Lpg0393_VPS9
RA_3
RA_2
SH2_1
Motif
Other DBs
NCBI-GeneID:
106607022
NCBI-ProteinID:
XP_014059032
UniProt:
A0A1S3S3U3
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Position
ssa01:complement(58273089..58312660)
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AA seq
1081 aa
AA seq
DB search
MSICSVIEHSEEKKGRFFKLIDSFVWEIGTLKKEMVQKAEQAEGDPEPVILQGLDGQVRG
LFLQAPSCVGVMAGLAGVKDSGYDSLRRRMSVLDRLVQTHTVWLQLGLSRAEATCKLQPQ
PTGTFLVRKSTTLQRKVISLRMDQDSETPFKDFPVKECQYTFSLEGSGLSFADLFHLVAF
CCISRDVLPFTLKLPEAISAARTPTDLEEVAKLGAGFWDSERCRRRSSLSSLPRTTTHDQ
SPSLRQRSVYTPLVTRTPSQLKCTQSNGALCFINPLFLKVHHPEGGNHTFPSYPSHNNNP
QHLNNSSTATTVQVQQQHCTSNPERLKDSPQPHSDSPQSDSPGNSTQHHNSCGSVSQANR
VSLPPPPRPPPPCCAPRRPASPQRQRSMPEKISWINPPKEKERVGERKGSGLLSRLGSSL
SISPSSSFLSSSFLSSSPPKKRSISTPISIPLSLSSPSDVDCRLALDDQTIENAIALSLA
KRSLRNTTTPDDNTEGNSPSTQDQALSCREEGGGSGRRGRGGREEDSIQRLSDMSISTDD
STDSVDFSQGFFPPLAEPSPPTTNNLVLPLTHPYSSMEEDDDDDEAVFGVSMENDQDQDL
TITPPGLRTKRRASAGAMVIQQALRGHFRKMSGVFSSLLTPEKRAIRRVLELSRDKGSYF
GCLVQDYLSFLQEGGGCQAWQCHASGLELLQTLRHFITQMKSYLRQSSELDPPIESLIPE
DQIDYVLEKAMHKIVLKPLKGVVTAALQEFQVRNGAWQVLKENLSLAKARQPHEMGVANA
FPPDPVNIEKIRHKFHTMCKLYSPEKKVTMLLRVCKLIYTIMEHKSGCLYGADDFLPMLT
YVLAQCDMPQLDNEILYMMEVLDPSLLHGEGGYYLTSAYGAMSLIRNFQEEQAARVLSSE
TCNTLRQWHCRRTTQHSAPSVNDFQNYLRVAIQELDSGCTAKTLQVQPYATTEEICQICA
YKFKVPDPENYALILLTEGSCQQLAPDTHPQKIKAELHSRPQAAPFHFVFCRVANLNDLA
ATSFEPQSNLNDITLTKESEPNLNCVAFTPSDPQPNLNLGLSPSLSLSLPPNQHNGNSIS
I
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtccatctgctcagtcattgaacacagtgaggagaagaaagggaggttcttcaagctg
atcgactcgtttgtctgggagatcgggactctgaagaaggagatggtgcaaaaggctgag
caagcagagggagatccagagcctgtaatactacaggggctagatgggcaggtgcgaggt
ctattcctacaggctccttcctgtgttggcgtgatggcggggcttgctggagttaaggat
tcaggctacgactctttgcgtagaaggatgagtgtgctggacaggctggtgcaaacgcac
actgtgtggctgcagctgggactgagccgggcagaagccacatgcaaactgcaaccacag
cccactgggacgtttctggtgagaaagtcgactaccctgcagaggaaggtgatctctctg
cggatggaccaggactctgagacacccttcaaagatttccctgtgaaggagtgtcaatac
acattctccttggagggatcgggcctcagctttgcagacctgtttcatcttgtggctttc
tgctgcatcagcagggatgtcttgccattcactctaaagcttcctgaagccatctctgca
gccaggacgccaacagacttggaggaggtggccaagctaggagcagggttctgggactct
gagcggtgccgcaggaggagttctctctcctcgttgcccaggacaaccacccacgaccaa
tcacctagcctgaggcagagatccgtttacacccccctggttacccgcaccccgtcccag
ctgaagtgtacccagtccaacggggctctctgcttcatcaatcccctcttcctaaaggtt
caccacccagagggtggcaaccacacctttccctcctaccccagccacaacaacaacccc
cagcacctaaacaatagcagtacagctacaactgtacaagtacaacaacagcactgtacc
agcaacccagagcgacttaaagacagccctcaaccccatagcgacagccctcagagtgat
agccctggcaacagcacccagcatcataacagctgtggcagcgtgagccaggctaacaga
gtttccctcccgccacctcctcgccccccacctccctgctgtgccccccgtcgccctgcc
tcccctcaacgccagcgcagcatgcctgagaagatatcctggatcaacccccccaaagag
aaggagagggtgggagagaggaagggcagtggccttctctcccgcctgggctcctctctc
agcatcagcccttcctcatctttcctctcctcctctttcctctcctcctcccctcccaag
aagcgcagcatcagtacccccatctctatccccctgtccctctcctccccaagcgacgtc
gactgccgtcttgctctcgatgaccagactattgagaatgccatagctctcagtctggct
aagcggtcactgagaaacaccaccacccccgatgacaacacagagggaaacagcccgtcc
actcaagaccaagccctctcctgccgagaggaaggaggaggaagtggaagaagaggaaga
ggcggaagagaagaggacagcatccagcgcctgagcgacatgagcatttccaccgacgac
tccactgactcagtagacttctcccagggcttcttccccccactcgctgaacccagccca
cccaccaccaataacctggtgctgcccctcacccacccctacagcagcatggaggaagat
gatgatgatgatgaagcagtctttggagtgagcatggagaacgaccaagaccaggacctg
accatcacccctcccgggctgcgcaccaaacgacgagccagtgccggggccatggtcatc
cagcaggccctcaggggccacttccgtaagatgagtggggtgttcagctctctcctaacc
cctgagaaacgggccatacggagagtcctggagctgtccagggataagggctcgtacttt
ggctgcctagtgcaggactacttgagcttcttgcaggagggagggggctgccaggcctgg
cagtgccacgcctcagggctggagctgctgcagacgctacgccacttcatcacccagatg
aagagctacctacggcagagttctgagctggacccccccatcgagtcactcatcccagag
gaccaaattgactatgtcctagaaaaagccatgcataagatagtcctgaagcccctgaaa
ggtgtggtgacggcggccctccaggagttccaggtccgcaacggggcgtggcaggtgctc
aaggagaacctctcattggccaaggcccggcagccccatgaaatgggcgtggccaacgcc
ttccctccagatccagttaacatagagaaaatccggcacaagttccacaccatgtgtaaa
ctctattcacctgagaagaaggtgaccatgctgctgcgcgtatgtaaactcatctatacc
atcatggagcacaaatcaggttgtctgtatggggcagatgacttcctgcccatgctgacc
tatgtgttggcccagtgtgacatgcctcaactagacaacgagatcctctacatgatggag
gttctggatccttctctgctgcatggagaaggtggatactacctgaccagtgcgtacgga
gccatgtccctcattaggaacttccaagaggagcaagcagctcgtgtactcagctctgaa
acatgcaatacactccgccagtggcactgtcgccgcaccacccagcacagtgcgccctcc
gtcaatgacttccagaactacctgcgggtagcgatccaggagctggacagcggttgcaca
gccaaaactctgcaggtgcagccctatgccaccactgaagaaatctgccagatctgcgcc
tacaagtttaaagttcccgaccctgagaattacgccctaatcctgctcactgagggctca
tgccagcagctagcccccgacacacacccccagaagatcaaagctgagctccacagtcga
ccccaggccgcaccttttcactttgtcttctgtcgggtggctaacctcaatgacctggcc
gcaacctcgtttgaaccccagtccaacctcaatgacatcacacttaccaaagaatctgag
cccaaccttaattgtgtggcctttaccccttctgacccccagcccaacctcaacctgggt
ctcagtcccagtctcagcctcagtctaccccccaaccagcacaatggcaactccatatcc
atctga
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