Salmo salar (Atlantic salmon): 106607247
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Entry
106607247 CDS
T04363
Name
(RefSeq) rho GTPase-activating protein 23-like
KO
K20315
Rho GTPase-activating protein 21/23
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106607247
Membrane trafficking [BR:
sasa04131
]
Endosome - Golgi transport
Others
Others
106607247
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
106607247
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PDZ_6
PH_9
PDZ
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
106607247
NCBI-ProteinID:
XP_014059493
UniProt:
A0A1S3S565
LinkDB
All DBs
Position
ssa06:39118835..39217712
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AA seq
1850 aa
AA seq
DB search
MLASGRPVSGNLCAPMPAAMPPYPALPAESEWCFQNPVGVDCSAAEPRCIWLAVLRGAPL
SSPSPPTMRPVPVGNGHGCTSRALQRSHQPRAKGWRDGLSSAGDNPRPAMGAGGEGVGVG
WQGPRTLLLQKNSQGFGFTLRHFIVYPPESALHTSLKDEENGNGKGRSRLEPMDTIFVKN
VRERGPAHQGGLCTGDRLVKVNGESVLGKTYSQVIALIQNSESVLELSIMPKDEDVLQLV
SAYSQDAYLRGNEPYTGGARNLPVPPPLCYAPRAKSQPPAGAPAPMGQNQLDNWSRWAGS
ASPLSPLDNRSTVGSPASWQEGLGREPGGVGHSSPPYRTEEIQYGVTGQQPTGQTRGRSY
SSSSSSGGPLSSPLHVHYVNHNAAGTATTASSQPQKGSQAWASPPQPSPSRSQHCQQALS
EWYYSQAAEQRQGRSGSMHHRHRSYSQDRLCETGPGCHRRGPGGWPHSASQDTLMLLQQS
GPGPHGDPSWTYGDWEGARDQSHPSFYGSRARSENLLVQYDRYGRSLEMLESPRSERPAW
LQQASQQAPRTEAYQRQGNHYGVAPAPSMGRQAQPHHKNHPQPHSQSHPQPQPQQPAPQS
RRLPTGQSLDDQPVGYRSYSPSFNRKTGRIMQQPSFRDPSYLGPHLSWAPTPKTSPPEGV
VPSVPSPLASTTPEPLDRAYRPTNHERGAMEGQVEVVAQTPEVKLRQKPPTGRRSAHAMR
HPHYTLPVDGTEPPVFPPEPHETAPAPRPSGDGAPHRTNGNLAPLSVEDDAMASIPFIDE
PTSPSADLRARHVPASSVVSSGMSSAPAIVTSPASPTFTFPLTRLFSHDCSSIKSSRRSS
YLLAITTERSKSCDEGLNTFRGEEGRVFSRLPKRVKSFFTDGSLDSLGAAEEVRSKRHST
SELGSISYSDIWREGWLHYKQILTEKGKKVGSGMRPWRRVFSVLRSHSLFLYKDKREAVL
RGATLGGDADEEQPISIRGCLVDIAYSETKRKHALRLTTQDFCEYLLQAEDREDMLDWIK
VISENSKTDNEELGFSRQALISKKLNDYRKQSPTGNKPDSSPRVSRAKPSFLLAKMENAA
GAPRSPKPEGKDESSPPKSPWGINIMKKSKKSGPKAFGVRLEDCQPAANNKFIPMIVEIC
CGLVEEMGLEYTGIYRVPGNNAVVSSLQDQLNKGSDINPAEEKWQDLNVISSLLKSFFRK
LPEPLFTDDKYNDFIDANRMENAGDRLKTMKKLIRDLPDHYYHTLKFLVGHLKTVADHCE
KNKMEPRNLALVFGPTLVRTSEDNMTDMVTHMPDRYKIVETLIQHYLWFFSEDLDKDEKT
PVDTKDLVPAPNIDHLLSNIGRTALLGEASDSTNSDSAKSKGSWGSKRDLTAKDFLTLSI
MSAVTGRKRRNRHNGRLVGSSTDDDSEHEPIKASHLGAEEGEEAGLVVTGADTAPRAEGE
EEEEEESVVERVRVQVEVKEVVVPSMPCSGEKEKAGQTVMLLPEEEAVTAEVKGRAWRGP
EDARSIVSGYSTLSTLGRSLASEGRCDEADDERSELVSETDNESGFASRSLTQERPEKHP
PASITPTLTPPTPTQPPTQPPTAAQRSFLYTHYKPHPVSPAPQHTTPTPSTHTQDPGERS
EGGARSTTPSSSSFSSSSTTHRLHTRPSFNSHKLIQCDTLARKKLKDRGKTKARSLDLLD
LPGPSGEEEGAGAPGAQRDRSRTNPSTGSSQESLRPPRPKEALLPSEAASFTPSGTGQGQ
GRGSLADQVRARLLGSADDLRIVGLRKPLSPETRRKRRAWRRHTVVVSPTETGDKRPALA
TNVLPMSPATSKPQGSPLDPQELDPRHPLPLGQNPPVTRRAPASRFHQYL
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgttggcatcaggtcggcccgtgtcgggtaatctctgcgccccaatgcccgcggctatg
cccccctaccctgctctaccagctgagtcagagtggtgcttccagaatcccgtaggggtg
gactgtagtgccgccgagcctcgctgcatctggttggcagtgctgcgtggtgcccccttg
tcctcaccttcaccccccaccatgaggccagtcccggtcggcaatgggcacggctgcacc
agcagggccctgcaacgttctcaccagcccagggcaaaggggtggagagatgggctctcc
tcggccggcgacaaccctcggcctgcgatgggggctggaggagagggggtcggcgttggc
tggcaaggcccccggacgctactactccagaagaactcacagggctttggcttcacgctg
cgccacttcatcgtctacccaccagagtctgccctgcacaccagcctcaaggacgaggag
aacgggaatgggaaggggagaagtaggttggagccaatggacaccatatttgtcaagaat
gtgagagagcgaggtcccgctcaccagggtggcttgtgtacaggggatcggctggtgaag
gtgaatggagagagtgtcctggggaaaacttactcccaggtgatcgccctcatacagaac
agtgaaagtgtgttggagctctctataatgccaaaagatgaagatgttctccagctggta
agtgcatactcccaggatgcctacctgaggggcaacgagccttacacagggggagcccgg
aacctaccggtacctccgcccctctgctacgctccccgcgccaagtcccagcctcccgcc
ggggccccggcccccatgggccagaaccagctggacaactggagccgctgggcaggctcc
gccagccccttgtcccccctggacaaccgctccaccgtgggcagcccggccagctggcag
gagggactgggcagagagccggggggcgtgggccacagtagccccccctacaggacagag
gagatccagtacggtgtgaccgggcagcagcctacgggacagaccaggggccgctcctac
tcctcatcttcttcttcaggagggcccctcagcagccctctgcatgtccactatgtcaac
cacaatgctgctggcactgccaccaccgcctcctctcagccccagaagggcagccaggcc
tgggccagccctccccagccgagccccagccgcagccagcactgccaacaggccctgtct
gagtggtactacagccaagctgctgagcagcgccagggccgcagtggcagcatgcaccac
cgccaccgcagctactctcaggacagactatgtgagacaggccctgggtgccaccgccgg
ggtccgggcggctggccccacagcgcctcccaggataccctgatgctactgcagcagtcg
ggcccaggcccccacggggacccttcttggacctatggagactgggagggggcccgggac
cagagtcacccctccttctacggcagcagagcccggtcggagaacctgctggtacagtac
gaccgctatggccgctcgctggagatgctggagtcgccccgttccgagaggcccgcctgg
ctgcagcaggcctcacagcaagcacccaggactgaggcctaccagaggcagggaaaccat
tacggtgttgcaccggccccctctatgggccgacaagcacagccgcaccacaaaaaccac
ccccaaccccactcacagtctcacccacagccccagccccaacaaccagcccctcagagc
agacgtctgcccaccggacagagcctggacgaccagccagtaggttaccgcagctacagc
ccctccttcaaccgcaagacaggccgcatcatgcagcaaccctccttcagggacccctcc
taccttggcccccacctcagctgggcccccacccccaaaaccagccccccagagggtgtt
gtcccctcagtcccatcccccctggcttccaccacccccgagccccttgacagggcctac
cgccccaccaaccatgagaggggggcaatggaaggccaggtggaggtggtagctcagacc
ccggaagtcaaactgagacagaaaccccccacgggacgaaggagcgcccacgccatgcgc
cacccccactacaccctgcctgtagatggcacagaaccccctgtgttcccccctgaaccc
cacgagactgcccccgcccctcgcccctcaggagatggtgccccgcaccgtaccaatggc
aacctggcccccctgtctgtagaggatgacgcaatggcctccattccctttatagatgag
ccgacgagccccagcgctgacctccgtgcccgccacgtacccgcctcctccgtggtgtcc
agcggcatgagctcggcgcccgccatcgtcaccagccccgcctcccccaccttcaccttc
cctctaaccaggctcttctcacacgactgcagcagtattaaatccagtcgccgttcctcc
tatcttctagccatcaccacggagcgctccaagtcatgtgacgagggactcaacaccttc
agaggagaggagggccgcgtcttctcgaggctgccaaagagagtgaagagtttcttcact
gatgggtctctggacagtctgggggcggcggaggaggtgcgctccaaacgccactccacc
tcagagctgggcagtatcagctacagtgacatatggagagagggatggctgcactacaaa
cagatcctcacggagaagggcaagaaggtgggcagcggcatgcgtccgtggaggcgggtc
ttctcggtgttgcgctcccactcgctcttcctctacaaggacaagcgggaggcggtcctg
cggggcgccactctgggaggcgatgccgacgaggagcagccaatcagcatccggggctgc
ctggtggacatagcgtacagcgagaccaagcgtaagcacgcgctgcgtctgaccactcag
gacttttgtgagtacctgctgcaggccgaggacagagaggacatgctggactggatcaag
gtcatcagtgagaacagcaagaccgacaatgaggagctgggattctcaagacaggctctg
atcagtaagaagctcaatgactacaggaaacagagtccaacgggcaacaagccggactcc
tcgcccagggtgtcccgtgccaagccttccttcctgctggccaagatggagaacgctgcc
ggggcgccgcgctcacccaaacctgagggcaaagatgagagcagcccccctaagtcacca
tgggggatcaacatcatgaagaagtccaagaagtcagggcccaaggcttttggagtgcgg
ctagaagactgccagccagccgccaacaacaagttcatcccgatgatcgtggagatctgc
tgtgggctggtggaagagatgggtctggagtacaccggtatctacagggtcccagggaac
aacgcagtggtgtccagccttcaggaccagctcaacaaggggtcggacatcaaccctgcc
gaggagaaatggcaggacctgaacgtgatcagcagcttgctcaagtctttcttcaggaaa
cttccggagcccctcttcactgatgataagtacaatgacttcatcgacgctaaccggatg
gagaatgccggggaccggctaaagaccatgaaaaaattgatccgtgacttaccggaccat
tactaccacactctcaagttcctggttggccatctgaagacggtagctgaccactgtgag
aaaaacaagatggaacctcggaacttggccctggtgttcgggcccacgctggtgcggacg
tctgaagacaacatgacagacatggtgactcacatgcctgaccgctacaagatagtagag
acgctcatccaacattatctctggtttttcagtgaggacctggacaaggatgagaagact
ccagtagacacgaaggacctggtgcctgcccccaatatcgaccacttgctctccaacatc
ggcaggaccgctctgctaggggaggcgtcagactcaaccaacagtgactcagctaaatct
aaggggtcgtgggggtcaaagcgagacctcacagccaaggactttctgaccctgtccatc
atgtccgccgtcaccggacgaaagcgccggaatcgccacaacggccgcctcgtgggcagc
agcacagatgacgactcggagcacgagccaatcaaagccagccacttgggggcggaggag
ggagaagaggcggggctggtggtgacaggagcagacactgccccacgagcagagggagag
gaggaggaagaagaagagtctgtagtagagagagtgagagtgcaggtggaggtaaaggag
gtggtagttcccagcatgccgtgcagtggtgagaaagagaaagcagggcagacggtgatg
ctgctccctgaggaagaggcggtgacggcggaggtgaagggcagggcatggcgggggcca
gaggacgctcgctctatcgtctccggttactccaccctctccacactggggcggagcctg
gcgtcggagggacggtgtgatgaagctgacgacgagcgcagcgagctggtgagcgagacg
gacaacgagagcggattcgcctcgcgctcccttacccaggagagacctgagaaacacccc
cctgcatccattacacccaccctcacaccccctacccccacacagccccccacacaaccc
cccacagcagcacaacgaagcttcctctacacacactacaaaccccatcctgtctccccc
gcaccgcagcacaccacccccaccccctccacacacactcaggaccctggggagaggagc
gagggtggggcgcgatccaccaccccctcctcctcctccttctcgtcgtcctccaccacc
cacagactgcacacccggccctccttcaactcccacaagctgatccagtgtgacacgctg
gccaggaagaagctaaaggacagagggaagaccaaggctcgttctctggacctgctggac
ctccctgggccttcaggagaggaggagggagctggggcaccaggggcccagagggaccga
tccaggaccaacccttccacagggagcagccaggagagcctgcgtccaccccggcccaaa
gaagccctgctgcccagcgaggctgcctctttcacccccagcgggacagggcagggtcag
gggcgagggtctctggctgaccaggtgcgtgcgcgcctgctgggctcggctgatgacctg
cgtatcgtggggctgaggaagccactctccccggagacgaggaggaagagacgggcctgg
agaagacacactgtggtggtctcacctaccgagacgggcgacaagaggcctgcgctagcc
accaacgtgttacccatgtcgccggccacttccaaaccacaggggtcacccctcgacccc
caggagcttgacccaagacatcctcttcccctgggacagaatccccccgtcacacgccga
gcaccagcctccaggttccatcagtacctgtaa
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