Salmo salar (Atlantic salmon): 106607420
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Entry
106607420 CDS
T04363
Symbol
dhx32
Name
(RefSeq) DEAH-box helicase 32 (putative)
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106607420 (dhx32)
Enzymes [BR:
sasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106607420 (dhx32)
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106607420 (dhx32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
DEAD
Motif
Other DBs
NCBI-GeneID:
106607420
NCBI-ProteinID:
XP_014059826
UniProt:
A0A1S3S666
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All DBs
Position
ssa01:63108779..63116050
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AA seq
733 aa
AA seq
DB search
MAQGITGEKYWEDRVAFETEGAGKEVVEYGDVLELNRFDGLPYSSRYYTLLKERMDLPVW
KARCDFMDKLANRQFIIVSGTARTGRSSQIPQWCAEFCLSVQYQNGMVVCTQVHRQHTVD
LALRVADEMDVNIGHEVGYSIPLETCCSGDTVLRYCTDDMLLREMMSDPMLEHYGVIVID
QAHERTVSTDVLLGLLKDIALQRPELRVVLLTATHPGPTLLGHYRNVPLIQLEGVCSAEA
VYTGTSHKDYFCSALRLVLEIHHSQEEGDIVVFLATTQEIDLARDILLREEANIPPHLGE
LLPISVHPGLGGTLPMPGEEEGRCRRVFLTSSPNEDLFWAVHMLNFVIDAGVQKRNVYNP
RIRANSVAIQPISRIQAESRKQLVGPTGKSFCLYPEDTPLPSETRPHILESDITSTVLFL
KRMDIGGLGRCDFIDRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEFPLEPQMAKT
LLASCEFDCVNEVVTIAAMLTAPSCFLVPSRELRLEASQCHLKFQHPEGDHFTLINIYKA
FKQNQHEPFVSVEKWCQDYFLSLSALQTADAIRSELTDILRRIELPVSMPSFGSKGNTLN
IKRALLAGFFMQVARDVDSSGNYFMLTHKHVAQIHPFSAYGTKTPKLGLPEWVLFHQYSF
SEDNCIRTVSHISPEEFIQMAPQYFFFNLPPSESKDILQNILDNGAEHYKAKKIQKSPSL
ESIPEVTASCVIQ
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagggcataaccggagagaagtattgggaggatagagtagccttcgaaacagaa
ggagcaggtaaagaagttgtagaatatggtgatgttttggagcttaatcgatttgacgga
ctaccctactcctctcgatattacacattactgaaggaaaggatggatctgccagtttgg
aaagccaggtgtgatttcatggacaagctggccaacaggcagtttattattgtctctggc
actgcaagaactggcagaagctctcagattccccagtggtgtgcagagttctgcctgtct
gtccagtaccagaatggcatggtggtgtgcacccaggtccacaggcaacatacagtggat
ctggccctgcgtgtagctgatgagatggatgtcaacattggtcatgaagtgggctacagc
atccccctagagacatgctgctctggtgacactgttctcaggtactgcactgatgacatg
ctgctcagagagatgatgtcagaccccatgctggagcactacggtgtcatcgtcatcgac
caagcccacgagaggacggtcagtacagatgttctactgggccttctcaaagacatcgcc
ctgcaaaggcccgagctccgtgtggtgctcctcacagctacacacccaggacccacacta
ctgggccactacaggaatgtcccactgatccagctggagggggtatgttcagcggaggcg
gtgtatactggtaccagccacaaggactacttctgctctgccctgcgactggttctggag
atacaccactcccaagaggaaggggatatagttgtgtttttggccacaactcaagagata
gatcttgcccgtgatatcctccttcgcgaggaggccaatatacccccacatctaggggaa
cttctccctatctcggtgcaccctgggctgggtggaactctgcccatgccgggtgaagag
gaaggccggtgcagaagagtattcctcacctccagtccaaatgaagacctcttctgggct
gtgcacatgctgaactttgtcatcgatgccggtgtccagaaaagaaatgtttataaccct
aggatcagagcgaactcagtcgccattcaacctatcagtcggatccaagcagaaagccgc
aaacagcttgtaggaccaacagggaagagtttttgtctgtacccagaggacacacccctg
cccagtgagacacgcccccacatccttgagtctgacatcacatccacggtgctcttcctg
aagaggatggacattggcggtctgggccgctgtgactttatcgacaggccagatcctgag
ggtctgatgcaggccttggaggaactggactatctagcagccctggatgacgatgggaac
ctgtcagagatcggcatcatcatgtctgagttccccctggagccccagatggccaagaca
ctactggcctcctgcgagtttgactgtgtcaacgaggtggtcaccatcgccgccatgctg
acagcaccaagctgcttcctggtcccctcaagggagttgaggctagaggcctctcagtgt
cacctgaagttccagcacccagagggagaccacttcaccctcatcaacatctacaaggct
ttcaaacagaaccagcatgagccctttgtcagtgtggagaagtggtgtcaggactacttc
ctgagtctgtctgccctgcagacagctgatgctatccgctctgagctgactgacatcctg
aggaggatagagctgcctgtctccatgccttcctttggctccaagggaaacactctcaac
attaagagagcgctgctagcaggcttcttcatgcaggtggcaagggatgtggattcatca
gggaattacttcatgttgacacacaagcacgtggcccagatccaccctttctctgcctac
ggcaccaagacacccaaactgggcctgccggagtgggtcctcttccatcagtactccttc
tcagaggacaactgcatccgcaccgtgtcccacatatcaccagaggagttcattcagatg
gctccacagtacttcttcttcaacctgcctcccagcgagagcaaggacatcctccagaac
atcttagacaatggagctgaacactacaaagcgaagaagattcaaaagagccccagccta
gagagcataccagaggttaccgccagttgtgtcatacagtga
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