Salmo salar (Atlantic salmon): 106607427
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Entry
106607427 CDS
T04363
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00310
Lysine degradation
sasa00514
Other types of O-glycan biosynthesis
sasa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
106607427
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
106607427
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sasa01003
]
106607427
Enzymes [BR:
sasa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
106607427
Glycosyltransferases [BR:
sasa01003
]
O-Glycan biosynthesis
O-linked Gal type
106607427
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
CAP59_mtransfer
DUF6492
Motif
Other DBs
NCBI-GeneID:
106607427
NCBI-ProteinID:
XP_014059839
UniProt:
A0A1S3S669
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Position
ssa06:43822925..43848754
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AA seq
609 aa
AA seq
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MHRYIFLLSTALTLLFSGPAQGYFPEERWSPESPLLAPRVLIALVCRNSEHSLPYFLGTI
ERLNYPKDRVAIWVATDHNVDNTTAILRDWLVKVQKLYHYVEWRPQEEPTEYQDADSPKQ
WTNLRYAHLMKLRQAALDSARDMWADYFMVVDCDNLLTNPNVLWKLIKENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLIDLRKEASRQLAFHP
PHPDYSWAFDDIIVFAFSSRMADVQMFLCNRETYGYFPVPLRAHNSLTDEADSFLHSLLE
VNVRNPHVLPSEYIPAPVKIQDKLGFDEVFMINLKKRTDRRDRMLRTLYEQEIACKVIQA
VDGKAMNISEINALGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIAERGLKSSLVI
EDDLRFEVFFKRRLMNLMSEVESQGLDWDLIYIGRKRMQVDRPEKSVPNIHNLVEADYSY
WTLGYMMSLQGAQKLLRAEPLKRILPVDEFLPVMFNKHPVSDYMEHFEERDLKAFSAEPL
LVFPTHYTGDPGYISDTETSVVWDNEKVRTDWDRARSGKTQEQAEISSEAQNSDVLQSPL
DSTATRDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggtacatcttccttctgtccaccgccctgacgttactgttctccggaccagct
caaggatacttccccgaagaacgctggagccccgaatctccacttcttgcccctcgggtc
ctcattgcccttgtctgccgcaactctgaacattctctgccttatttccttggaactatc
gaacgtctgaattatcccaaggaccgcgtggcaatttgggtagcgacggaccacaatgtg
gacaacactacagccatcctgcgtgactggctcgtcaaggtccaaaaactctaccactat
gtggagtggaggccgcaggaggagcccacagagtaccaggatgcagacagcccgaagcag
tggaccaacctccgctacgcacacctgatgaagctacggcaggcagcactggactccgca
agagacatgtgggcagactacttcatggtggtggactgtgataacctattgaccaatcct
aatgtactgtggaagctcatcaaggagaacaagaccatcgtagctcccatgttagagtcc
cgtgcagcctactccaacttctggtgtggcatgacctcccagggttactataagcgcacc
ccggcctacatccctatgagaaagcaggtgcgtaaaggatgcttcgcggttcccatggta
cactccaccttcctgattgacttgaggaaggaggcatcacgccagctggccttccacccc
cctcacccagactacagctgggccttcgatgacatcattgtcttcgccttctcctctcgc
atggcagatgtgcagatgttcctatgtaacagagagacttatgggtatttccccgtgcca
ctgcgagcccacaactccctgacagacgaagcagacagcttcctgcattccttgttggag
gtcaatgtgcggaaccctcatgtgctgccctcggagtacatcccggcccccgtaaagata
caagataaactgggctttgatgaggtgttcatgatcaacctaaagaaacggaccgatcgg
cgggatcgcatgctgaggactctgtacgagcaagagattgcctgcaaggtcattcaagcg
gtagacggcaaagcgatgaacatcagtgagatcaatgccctggggatccacatgctacca
ggctacagtgacccgtaccacggtaggcccctcaccaagggagagctgggctgcttcctc
tcacactacaacatctggaaagagatcgcagagcggggtctaaagagttccctggtgatc
gaggacgatctgcgtttcgaggtcttcttcaagcgacgcctgatgaacctgatgagtgaa
gtggagagccaggggctagactgggacctgatttatatcggcaggaagaggatgcaggtg
gaccgccctgagaagtccgtgcccaatatacacaacctggtggaggccgactactcctat
tggacgctgggctatatgatgtcattacaaggagcccagaagctgctgagggcagagccg
ttgaagaggatattacccgtagatgagttcctccctgtcatgttcaataaacaccctgtc
tcggactacatggagcactttgaggagcgggacctgaaggccttctcagccgagcccctg
ctagtgttccccactcactacacaggagacccgggctacatcagcgacacagagacctcc
gtggtgtgggacaacgagaaggtgcgtacggactgggaccgggcccgctcggggaagacc
caggagcaggcggagatcagcagcgaggcccagaactctgacgtactccagtcacctctg
gacagcacagccacacgggacgaactatga
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