Salmo salar (Atlantic salmon): 106607455
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Entry
106607455 CDS
T04363
Name
(RefSeq) integrin alpha-IIb-like
KO
K06476
integrin alpha 2B
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04810
Regulation of actin cytoskeleton
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106607455
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106607455
09142 Cell motility
04820 Cytoskeleton in muscle cells
106607455
04810 Regulation of actin cytoskeleton
106607455
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106607455
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106607455
04515 Cell adhesion molecules [BR:
sasa04515
]
106607455
04090 CD molecules [BR:
sasa04090
]
106607455
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106607455
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106607455
Cell adhesion molecules [BR:
sasa04515
]
Integrins
Integrin alpha subunits
106607455
CD molecules [BR:
sasa04090
]
Proteins
106607455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_1
FG-GAP_3
Integrin_alpha
PH1_SSRP1-like
Motif
Other DBs
NCBI-GeneID:
106607455
NCBI-ProteinID:
XP_014059891
UniProt:
A0A1S3S6C4
LinkDB
All DBs
Position
ssa06:43103787..43117945
Genome browser
AA seq
1060 aa
AA seq
DB search
MEEHRIHTSTQMMGLLLFALPHYSDTLNLNLVNFTEFSGPEGSFFGFSADFYQFNNKTIG
VVVGAPRANTSQPGVTEAGAVYLCPWAQTGGACTSMTFDTKGDEVYPHQNLVIRSSKYHQ
WFGATVRSSGNYIVACAPLFHWNVIDVGERDEAQNTPVGNCLVLNTLTGETVNFSPCRDI
MTEKVYKVLKYNKDRRYCEVGFSSDITKEGRLLIGAPGGYYFQGQIISAGLPDIVNSANS
QNAKPYVAGQTHSPETGGYDHYHGYSVAAGEFTGDSIPDYVVGVPNDRNTAGSVKIYDGN
TIDFLGVKHTFLGSQVASYFGHSVAVTDINNDGQDDILIGAPLFMERVSGQQLQEVGQVS
VYLQRGRSTFHSKPDQKLTGSQVYGRFGSTIAPLSDLDNDGFNDVAVGAPSSGIEGRVFI
YMGSSDGLSPQYTQVIESPFRSLGPSPAQFGFTLRGATDIDSNGYPDLIVGAWGVNKIAV
YRAQAVVMAKTQLSLYPDFLNPDVKECEHTTTNEPVACFTVMMCISVSGHSIPEEIVLDA
ELQLDKMKQPMARRTLLLHTNLPQEYFQLTIQRDVGVVCRNQTAYLRHESEFKDKLSPIF
ISLNYSLSNSNSQETILHGQRAVVAQTRIILDCGEDNVCVPDLRLTSEEGTDHLLIGDDH
PALLVITAENRGEGAYETELEIRPPANTHYQSMVTDREGFSRLICAQKKENQTVVVVCEL
GNPMKQGQKLQAGLFFSVGNLEKVESHVSVTLQIKSKNSQNPDSNVAHLRIDVSAEATLE
MRGGSSPPECVLPIAKWEQKEQPADLEEVGPLVEHVYELRNLGPSTVNARVVVEFPTHHH
GDLLLYVFANASEDFLICHSDSPDIDPYQLVKTGNPTVGTVYKVKQNEVERPEPQHKETV
HVNCTSGDTCLRFVCEAKGLERGWSAVVKVMSRLWVQTFLERPYENYVLHSSACYAVIDM
PSKIQPEELPSGQAETQTSVVWRAPDGEKEVPVWWNVLAVVSGLFLLTLLALIFWKVGFF
NRNRPPCDDDDDDDDNAEQLAGAGQPEYAEMPPNTEDKQE
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacaccgcattcatacatcaacacaaatgatgggtctcctgctgtttgctctc
ccacattactctgacaccttaaatctaaacctggttaatttcactgagttctctggccct
gagggaagcttctttggattctctgcagatttctatcagtttaacaacaaaaccatcggt
gttgtggttggggcccccagagccaacaccagtcagccaggagtcacagaggcgggggct
gtgtatctctgtccctgggcacagacaggaggggcctgtactagcatgacctttgacaca
aaaggtgatgaggtttatcctcaccagaacttagtgataaggtcttcaaagtaccaccag
tggtttggcgctactgtgcgatcctctggaaactacattgtggcctgtgcccctctgttc
cactggaatgtgatagacgtgggtgaacgtgatgaggcccagaacactccagtggggaac
tgcctagtgttgaacacactgacaggggagacggtcaacttctccccctgcagagacatc
atgactgagaaggtttacaaagtcctgaagtacaataaagacagacgatactgtgaagtg
ggatttagctccgacataacaaaggagggaaggctccttattggtgcccctggaggctac
tactttcaaggtcagatcatcagtgcaggactgcctgacattgtcaacagtgccaacagc
cagaatgccaaaccttatgtggctggacaaacccattcccctgagactggtggatacgat
cattaccatgggtattctgtggccgctggcgagtttactggagactcaataccagattat
gtggttggagtacctaatgaccgcaacacagctggctcagtcaaaatctatgatggaaat
acaattgactttttgggagtgaaacacacattcttaggctctcaggtggcctcttacttt
ggccacagcgttgcagtgactgacattaacaatgatggacaagatgacatcctaattggg
gcgcccctcttcatggagcgtgtgtcaggccagcagttgcaggaggtgggccaggtgagt
gtgtacctgcagagagggcgctccaccttccactccaagccagaccagaagctgacaggt
tcccaggtatacggacgctttggcagcaccatcgcccccctcagtgacctggacaatgac
ggttttaatgatgttgctgtgggagccccatcctcaggcattgaagggagggttttcatc
tacatggggagtagcgatggactgtctccccagtatacccaggtcattgagagtcccttc
cggtccctaggtccctctccagcacagtttggcttcaccctgagaggagccactgacatt
gattcaaatggctacccagatctaattgttggtgcatggggagtcaataagattgctgtg
tacagggctcaagccgtggtgatggcaaagacccaactctccctctaccctgacttcctg
aacccagatgtgaaggagtgtgagcacaccaccaccaacgagcctgtggcctgcttcaca
gtcatgatgtgcattagtgtgtctggccacagcattccagaggagatagttctagatgca
gagcttcagctggacaagatgaaacagccaatggccaggaggaccctgttgctgcacaca
aatctgccccaagagtatttccagctaaccattcagagagatgtgggagtggtctgcaga
aaccaaaccgcttacctaaggcatgagtcagagttcaaggacaagttgagccccatcttc
atctccctgaactacagcctgtccaactccaactcccaggagaccatactgcatggccag
agagctgtggtcgcacagaccaggatcattctggactgcggagaggacaatgtctgtgtc
cctgacctgaggctgacttctgaagaaggtaccgaccatcttctgataggggatgaccac
cctgccctgctggtcatcacagcagagaacagaggagagggggcctacgagaccgagctg
gagatacgcccaccagccaacacacactaccagagtatggtgactgacagagagggcttc
agcaggttgatctgtgctcagaagaaggagaaccagacggtggtggtggtctgtgagctg
ggaaaccctatgaagcagggccagaagctccaggccggtctgttcttcagcgtggggaac
ctggagaaggtggagagccacgtgtcagtcacattacagatcaaaagcaagaacagccag
aaccctgacagtaatgtggcccatctgaggatcgatgtcagcgctgaagcaactctggag
atgcgggggggctcctctccacctgagtgtgtcctgcccattgccaagtgggaacagaag
gagcagcctgctgacctggaggaggttggcccgctagtggaacacgtctatgagttgaga
aacctgggtccgagcacggtcaacgccagggtggtagtagagttccccacacatcaccat
ggagacttactgctctatgtgtttgctaacgcctccgaggatttcctcatctgccactct
gactcccctgacatcgacccatatcagttggttaagaccgggaatcctactgttggtaca
gtgtacaaggttaaacagaatgaggtggaacgaccggagcctcagcacaaagagactgtt
catgtgaactgcaccagtggagatacctgtctgaggtttgtgtgtgaggccaaaggtctg
gaaagaggctggagcgctgtagtgaaggtgatgtcccgactctgggtacaaaccttcctg
gagaggccttatgagaattatgtcctccactcttcagcatgctatgcggttatagatatg
ccctctaagatccagcctgaagagctgccaagtggacaggctgagacccagaccagtgtg
gtgtggagggctcctgatggagagaaggaggtgccggtgtggtggaacgtcttggctgtg
gtctctggcctattcctcctcactctgctagctttgatcttctggaaggtggggttcttt
aatcgcaaccgtcccccgtgtgatgatgatgatgatgatgatgacaatgcagaacagcta
gctggggctggacagcctgaatacgctgagatgcctccaaacacagaggacaagcaagaa
taa
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