Salmo salar (Atlantic salmon): 106607603
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Entry
106607603 CDS
T04363
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A-like
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106607603
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
106607603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
PMR5N
Mob1_phocein
Motif
Other DBs
NCBI-GeneID:
106607603
NCBI-ProteinID:
XP_014060170
UniProt:
A0A1S3S752
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Position
ssa06:complement(48176110..48182419)
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AA seq
467 aa
AA seq
DB search
MDDLESEPRVPGEEQGENESSDDDESINRKRIKKLNLPLAPPLFKETTCETGFHKTTRNC
LQHIREDLLHHRWQDAADYMASYSQTLEDTTANMPQLYAEIIWRIGTEILHHHPDSKLED
YNSFYERVKHSGVKNYLKVCLEHSFHLLVNGQFEDAKRQLSIAESWRYGKLSAGQSQRIR
LIQAYSGFLDYFIWCDKKATASSTDEYDAAVNQEMHSYFRQSSVNLKEIMKLPGVWDPFV
LSYIDMLEFYNDHEGAVKVLNDYAYDKSFPPNPNAHVYLYRYMKKQNHPLKKLLKVLKIL
HTLVPSHELMPEYCSLLVQSVKDEFFPEKEGDLQKALGVVLDLLDYSSWRSNLAVWNHLM
NIIKRLRMKKQWLKIFAEEMGYRKDWWLAIHFSTFQARKDSAENRELLEVKSFVVGAFCP
RYTSMYCGVGKAARKGVTSEVQKAKRNPKQLRNIRRLRRESGQQSQD
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctggagtcagaacccagggtgcctggagaagaacagggcgaaaatgagtct
tcagatgacgatgaatcaatcaacagaaaacgaatcaagaaactaaaccttcccctggcg
cctcctttatttaaagagactacctgtgagactggctttcacaagaccacaaggaactgc
ctccagcacatcagggaggacttgctgcaccatagatggcaggatgccgcggattacatg
gccagttactcacagacactggaggataccactgcaaacatgccacaactctacgctgag
ataatttggaggataggcacagagatactacaccaccatcccgactcgaagctggaagac
tacaacagtttctatgagcgagtgaaacactcaggagtaaagaattacctgaaggtctgt
ctggagcactcgttccatctcctggtcaatgggcagtttgaggatgccaagcgtcagctg
tccatcgctgagagctggaggtatggcaagctgtctgccggtcagtcccagaggattagg
ctgatccaggcctatagtggcttcctggattatttcatctggtgtgacaagaaagccact
gcatccagcacagatgagtatgatgcagctgtcaaccaagaaatgcatagctacttccga
caatcttctgtgaacctgaaggagatcatgaagcttcctggcgtctgggatccttttgtt
ctgagttacattgatatgctggaattctacaacgatcacgagggagctgtgaaggttcta
aatgactatgcctatgacaagagtttcccccccaaccccaatgcccatgtctacctatac
cggtacatgaagaaacagaaccacccactgaagaaacttctcaaagtgctgaagatcctg
catacattggtcccaagtcatgagttgatgcctgaatactgttctcttctggtacagtcg
gtaaaggatgagttttttccagagaaagagggtgatcttcagaaggctctaggtgtggtt
ctggatctcctggactactccagttggaggagcaacttggctgtctggaaccatttgatg
aacatcatcaagagactgaggatgaaaaagcaatggctgaagatttttgctgaagagatg
ggttacagaaaggactggtggctagcaatacacttctcaacattccaggccaggaaagat
tcggcagagaatagagagctactggaagtgaagagctttgtggttggagccttttgtcct
cgctatacctccatgtactgcggtgttggtaaggcagcccgaaaaggagtaacttctgag
gttcaaaaggctaagaggaatcctaaacagctaagaaatataagaaggctcagaagagaa
agtggacagcaaagccaagactga
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