Salmo salar (Atlantic salmon): 106607669
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Entry
106607669 CDS
T04363
Symbol
cldn20
Name
(RefSeq) claudin 20
KO
K06087
claudin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03272
Virion - Hepatitis viruses
sasa04382
Cornified envelope formation
sasa04514
Cell adhesion molecules
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
106607669 (cldn20)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106607669 (cldn20)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106607669 (cldn20)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106607669 (cldn20)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106607669 (cldn20)
04147 Exosome [BR:
sasa04147
]
106607669 (cldn20)
04515 Cell adhesion molecules [BR:
sasa04515
]
106607669 (cldn20)
Cilium and associated proteins [BR:
sasa03037
]
Other cilia and associated proteins
Stereociliary proteins
106607669 (cldn20)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
106607669 (cldn20)
Exosomal proteins of colorectal cancer cells
106607669 (cldn20)
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
L1 family
106607669 (cldn20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
Motif
Other DBs
NCBI-GeneID:
106607669
NCBI-ProteinID:
XP_014060341
UniProt:
A0A1S3S7M7
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All DBs
Position
ssa06:complement(51240207..51252603)
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AA seq
313 aa
AA seq
DB search
MASSAMQILAFVLALLGVLGATVATLLPNWKVSADVGSNIMTAISQMQGLWMDCTWYSTG
VFSCTLKYSVLSLPAYLQTARTTMVLSCMMACLGLCLAALGLKCTRWGGSHRAKRHAAIG
AGGCFILAGILCLVPASWFTNEVITTFLDSNVPESSKYEPGGAVYVTFVSAGLLLAGGVI
FCLSCPGKREGQLDYTSTSTSTTFPDKLLQQQINQEQIQRDQLQRDLILQEQLQRGQKDF
EQQTSPNEQSSREQLQWGDKGPQDEAQAADEIQQEEPLHEKPLHEDKGTQQFYSPSRVPP
KDARAGYSLQDYV
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccgccatgcagatcctcgcctttgtcctggcgctgctgggcgtcctgggc
gccactgtggccacgctgctgcccaactggaaggtgagtgccgacgtgggctccaacatc
atgaccgccatctcccagatgcaggggctgtggatggactgtacctggtacagcaccggc
gtgttcagctgcaccttgaagtactctgttctttcactgcctgcctacctgcagactgcc
cggacgacaatggttctgtcgtgcatgatggcttgccttggcctctgtctcgctgccctg
gggctcaaatgtacccgctgggggggcagtcaccgggcaaagaggcacgcggccatcggg
gcggggggttgcttcatcttggctggtatcctctgcctagtgcccgcttcttggttcacc
aacgaggtaatcactaccttcctggactccaacgtacccgagagcagtaaatacgagcct
gggggggccgtgtacgtgacctttgtctctgccggcctactgctggccggtggggtcatc
ttttgtttgtcgtgtcccgggaaaagagaggggcagttggactacacctcgacatccacc
tctaccacctttcctgacaaactactgcagcagcagataaaccaggagcaaatacagcgc
gaccagctccagcgtgacctgatactgcaggagcaactgcaacgggggcagaaggacttt
gaacagcagacgtcgcctaacgagcagtcaagccgcgagcagctacaatggggtgacaaa
gggccccaggatgaggcccaagcagctgacgaaatccagcaggaggagcctctacatgag
aagcctctacatgaagacaagggaacgcagcagttctactctccatccagagtccctcca
aaagacgcccgggctggctacagcctgcaggactatgtttaa
DBGET
integrated database retrieval system