KEGG   Salmo salar (Atlantic salmon): 106607727
Entry
106607727         CDS       T04363                                 
Name
(RefSeq) collagen alpha-1(X) chain-like
  KO
K19479  collagen type X alpha
Organism
sasa  Salmo salar (Atlantic salmon)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 106607727
NCBI-ProteinID: XP_014060471
UniProt: A0A1S3S808
LinkDB
Position
ssa06:54231306..54237536
AA seq 661 aa
MDLRVTSVLLLLVALAVATPERYYHVQKVSKQQQHYPTKSHVQTVSGEPGIPGSPGEPGP
MGPPGPPGNNGVGHPGQQGPPGPSGPAGYSAPGKPGNPGGPGKPGSNGMPGEKGHPGAPG
AMGPRGSPGSAGSPGPAGYSSPGKPGPHGLPGGMGPRGESGLKGHPGIPGLQGQKGERGV
GIPGAPGANGQVGPMGPSGMPGQPGVGKSGATGYPGEPGKSGTPGRDGAPGAMGQPGPKG
HNGNPGVGAPGKSGENGSPGMPGNMGPKGPQGHAGQPGAPGIPGVGKPGANGMPGDRGSP
GTSGTTGQKGEPGPTGYTGATGATGLMGPAGPQGARGFQGEPGVQGSKGDVGMLGAPGAK
GTKGDQGHQGYAGKAGIPGAAGPPGATGATGHQGNKGAQGHAGSPGQPGSNGLAGAKGHP
GTPGGPGKPGESGIPGSRGPVGPSGPAGQAGPRGHAGLPGAPGPAGQMAKGMSGPMGPPG
PPGSRGHDGNTGAMGPPGPPGPPGEMVYHHEKSMPIKSHEIMMPHEMMKAPMSAFSAVLT
VAYPSAGSPVPFNQIIYNGEQHYDPQTGIFSCQVPGLYYFSYHMHVNGANALVALYKNGE
PIMFSYDEYNKGFLDQLSGSTVLMLNAHDQVYIQVPDEETNGVFAADNVHCSFSGFLIAS
T
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggacctcagagtgacaagcgttctcctcctcctggtggccttggccgtggcaacacca
gagagatactaccatgtacagaaagtatccaagcagcagcagcattatcctactaagagc
catgtccaaactgtttcaggtgagccaggtattcccggatcccctggtgagccaggacct
atgggcccccctgggcctcccggcaataacggcgtgggacatcctggacaacagggccca
cccgggccctccggacccgctggctactccgcacctggcaagcctggcaatccaggtggt
cctgggaaaccaggtagtaatggaatgcctggtgagaagggccatcctggcgcacctgga
gccatgggtccaagaggatcacccggttccgctggaagcccaggacctgctggatactct
tctcctggcaaacctggcccacacggtctgcccggaggcatggggccaaggggtgagagt
ggacttaaaggacatccaggtatccctggtctgcaaggacaaaagggagagaggggagtt
ggtattcctggggcaccaggtgcaaacggtcaagtgggcccaatgggaccctctggtatg
ccagggcaacccggagttggtaagtctggtgccactggataccctggggagcctgggaag
tcaggtactccaggtagggatggagctccaggagctatgggtcagccagggccaaagggc
cacaatggaaaccctggggtaggagcaccaggaaaatcaggtgagaatggcagtccaggt
atgcctggaaatatgggacctaaaggtccccagggacatgccggacaaccaggtgcacct
ggcattccaggagttggtaaaccaggagctaatggtatgccaggtgacagaggatcacct
ggtacatcaggaaccaccggtcagaaaggagagccagggccaacaggttacactggggca
acaggtgctactggccttatgggtccagctgggccacagggtgctagaggattccaggga
gaaccaggtgtgcagggatctaaaggggatgtcggcatgctgggagctccaggggcaaag
ggaaccaagggggatcagggacatcagggttacgcagggaaggcaggtatccccggggca
gccggccctcctggtgcaaccggcgctacaggacatcagggtaacaagggagctcagggc
catgctggctctcctggtcagccaggttcaaatgggcttgcaggagcaaagggacaccca
ggcacacctggaggcccagggaaaccaggcgagagcggcatcccagggtcaagaggacca
gtggggccttcaggtccagcaggtcaagcaggtcctaggggtcacgcaggtcttcccggc
gcacccggcccagctggccagatggccaagggaatgtctggtcctatgggtccacctgga
cctcctggttccagaggtcacgatggtaacacaggtgctatgggacctcctggcccacct
ggtccccctggtgagatggtctaccatcacgagaagagcatgcccatcaagtcccatgag
attatgatgcctcatgagatgatgaaggcccctatgtccgccttcagcgctgttctgaca
gtggcttacccatctgcgggttcacccgttccattcaaccagattatttacaatggggag
cagcactatgacccccagactggcatcttctcctgccaggtaccaggtctctactacttc
tcctaccatatgcatgttaacggtgctaacgcattggtggcactgtacaaaaatggtgag
ccaatcatgttctcatacgatgagtacaacaagggcttcttggatcagttgtctggcagc
actgtccttatgctgaatgcccatgaccaagtctacattcaggtccctgatgaggagacc
aatggtgtcttcgctgccgacaatgttcactgctctttctctgggttcctgattgcctca
acgtga

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